Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031764.1 Length=2600 Score E Sequences producing significant alignments: (Bits) Value seq19028 118 2e-23 >seq19028 Length=31091 Score = 118 bits (130), Expect = 2e-23 Identities = 228/332 (69%), Gaps = 11/332 (3%) Strand=Plus/Plus Query 1517 AGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACGATTGATGGAATCCCC 1576 ||||| ||||||||||||| | |||||||||||| | | ||||| || ||||| Sbjct 13843 AGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCA 13902 Query 1577 CCTTTAATAAGGACTGGCTTACCGTACTTGCAATTTGACTG--CCACATCTTTTGAGCCC 1634 || || || || ||| | ||||| || | ||| ||| ||| | |||| |||| Sbjct 13903 CCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTG-CTGGACCAATTGCTTTGGGCCC 13960 Query 1635 CTATCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCTATTACGT 1694 | || || ||||| |||||||||| ||| ||||| |||||| ||| || | || Sbjct 13961 CCATAAACTCTTTAAAGTGCTTTAG------ATAATGCGGATCGACGTTATCAATGATGT 14014 Query 1695 TATACTCCACTTCGTCTGAGAAAACCCGGGAATTGAAGTCTAGGTGTCCACTGAGATAAT 1754 ||||| | | | ||| ||| ||| || |||| || || | || |||| Sbjct 14015 TATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAAT 14074 Query 1755 TATGTGGGCCTAACGCACGTGCCCACATCGTCTTCCCCGTCCTAGAATCACCTTCGACGA 1814 ||||||| ||||| | | ||||||| |||||||| || ||||| ||||| || | || Sbjct 14075 TATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGA 14134 Query 1815 TGATACTAATAGGTC-TTTCCGGCCGCGCAGC 1845 ||||| | |||| || ||||||||||| Sbjct 14135 CAATACTCTTGGGTCGTTAATGGCCGCGCAGC 14166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8208244783988