Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_032006.1 Length=2632 Score E Sequences producing significant alignments: (Bits) Value seq19028 140 5e-30 >seq19028 Length=31091 Score = 140 bits (154), Expect = 5e-30 Identities = 249/359 (69%), Gaps = 12/359 (3%) Strand=Plus/Plus Query 1524 TTTTCCTCTTTGTCGAGAAAATCTTTATAGCTGGCCCCCTCTCCTGGATTGCAGAGCACG 1583 |||||||| | |||| || ||||||||||||| || |||||||| | | | Sbjct 13831 TTTTCCTCCT---CGAGGAACTCTTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAG 13887 Query 1584 ATTGATGGAATGCCCCCTTTAATTTGAACTGGCTTTCCGTATTTGCAGTTTGATTG-CCA 1642 |||| || || || || || || | || ||| |||||||||| | ||| | | ||| Sbjct 13888 ATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTATTTT-ACCTTGCTGGACCA 13946 Query 1643 GTCCCGTTGGGCCCCAATGAGCTCTTTCCAATGCTTCATCTTTAGATATTGCGGTGTGAC 1702 | | ||||||||| || | |||||| | ||||| |||||| ||||| ||| Sbjct 13947 ATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTT------TAGATAATGCGGATCGAC 14000 Query 1703 GTCATCAATGACGTTGTACTCCGCTTCGTTTGAGTAAACCCTAGAATTAAAATCAAGGTG 1762 || |||||||| ||| ||| || | ||||| |||| || ||| ||||| | || Sbjct 14001 GTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTCAAATCTAAATG 14060 Query 1763 TCCACTTAAATAGTTATGTGGGCCTAATACACGCGCCCACATCGTCTTCCCCGTCCTTGA 1822 || | || || |||||||| ||||| | |||||| |||||||| || || || Sbjct 14061 ACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTCCCTGTTCTAGA 14120 Query 1823 GTCACCCTCGATGATTATACTAATAGGTCTCTCC-GGCCGCGCAGCGGGATCCCTACCA 1880 |||||||| |||| ||||| | |||| | ||||||||||||| ||||||| || Sbjct 14121 CTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGCATCCCTAACA 14179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8310607930164