Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_033334.1 Length=2781 Score E Sequences producing significant alignments: (Bits) Value seq19028 248 2e-62 >seq19028 Length=31091 Score = 248 bits (274), Expect = 2e-62 Identities = 463/671 (69%), Gaps = 22/671 (3%) Strand=Plus/Plus Query 1705 CCTGGATTGCAGAGAAAGATAGTGGGAATTCCACCTTTAATTTGAACTGGCTTTCCGTAT 1764 || |||||||| | ||||| || || || ||||| || || | || ||| |||||||| Sbjct 13870 CCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTTACAGGCCTTCCGTAT 13929 Query 1765 TTACAGTTGCTTTGCCAGTCCTTCTGGGCCCCCATAAATTCTTTAAAGTGCTTTAGGTAT 1824 || ||||| ||| | | |||||||||||||| ||||||||||||||||| || Sbjct 13930 TTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAA 13989 Query 1825 TGGGGGTTGACGTCATCAATGACGTTATACCAAGCACTGTTGCTATACACTTTTGGACTC 1884 || || | ||||| |||||||| ||||||||| ||| | || ||| | ||| | || Sbjct 13990 TGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTTGAATAAATTTTATTATTC 14049 Query 1885 AAGTCCAGGTGTCCACACAAATAATTATGAGGACCTAATGACCGAGCCCATACTGTTTTT 1944 || || | || || || | |||||||| || ||||| || | ||||| |||| || Sbjct 14050 AAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGATCTTGCCCACTCTGTCTTC 14109 Query 1945 CCTATTCTACTTGGGCCTTCTATAACTATACTTATGGG-CCTATCCGGCCGCGCAGCGGA 2003 ||| ||||| || || || || ||||| |||| | | ||||||||||||| Sbjct 14110 CCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGTTAATGGCCGCGCAGCGGC 14169 Query 2004 ATCCATGACATTTTCAGCGGCCCAATCGCTGATAATGTCAGGTACATTATTgaaggaaga 2063 |||| | ||||||||||| |||| | | || | ||| ||||||||||| Sbjct 14170 ATCCCTAACATTTTCAGCTGCCC-AGCACTCA-------------ATTGTTGAAGGAAGA 14215 Query 2064 aagagaaaaaggagaagaatacacagaaggaggaggagagaaaaTCCTATCTAAATTCGA 2123 | | ||||||| | ||| |||||| || ||| || | |||||| || | Sbjct 14216 ACAACTAAAAGGACTAACATAAGGTTCAGGAGGGGGCATGAATATTCGATCTAATTTTGG 14275 Query 2124 ACATAAATTATGATATTGAAAAATAAATTTTTCAGGGAGTTTCTCCCTGATTATTTGTAA 2183 | || ||||||||||||||| | ||| ||| | || | ||| || || | || | | || Sbjct 14276 AACTATATTATGATATTGAAATAGAAACTTTGCTGGCATTTTTTCTCT-AATAATAGAAA 14334 Query 2184 G-GCAGCTTC-TTTGCTGCCGGAATTAAGTGCCTCTGCTGCTGCGTCATTAGCCGTTTGC 2241 | || |||| ||| || | | |||| || ||||| | | | ||||| | || || Sbjct 14335 GCGCTTCTTCAATTGATGTAGCACTTAA-CGCTTCTGCAGATACATCATTTGTTGTATGT 14393 Query 2242 TGGCCTCCTCTAGCAGATCTTCCGTCGATTTGAAATTCGCCCCAAGTGAGGGT-ATCTCC 2300 |||||||||||||||| ||| ||||||||||| | ||||| ||| | || ||| | Sbjct 14394 GAACCTCCTCTAGCAGATCGTCCATCGATTTGAAAATTGCCCC-AGTCGGTGTAATCACA 14452 Query 2301 ATCCTTATCGACGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGTATGTTTGGATG 2360 || || ||| ||| ||| ||||| || |||||||| || | |||||| || Sbjct 14453 GTCTTTCGCGATGTATTTCTTAACATCTGAAGATGATTTAGCGGATTGGAAGTTTGGGTG 14512 Query 2361 GAAATGTGCTG 2371 | ||||| || Sbjct 14513 G-TATGTGGTG 14522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8783944465970