Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_033554.1 Length=2738 Score E Sequences producing significant alignments: (Bits) Value seq19028 233 3e-58 >seq19028 Length=31091 Score = 233 bits (258), Expect = 3e-58 Identities = 282/381 (74%), Gaps = 7/381 (2%) Strand=Plus/Plus Query 1598 GCATTCTTGAGAGCCCAATTCTTTAATGCGCTGTTCTTTTCCTCGTCGAGGAATTCTTTA 1657 ||||| | | || |||||| |||||| | || |||||||| |||||||| |||||| Sbjct 13795 GCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTCTTTA 13854 Query 1658 TAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTCGGTATCCCGCCTTTAATTTGA 1717 || ||| | |||||||||||||| | |||||||||||||||||| || || || | Sbjct 13855 TAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTATCTTT 13914 Query 1718 ACTGGTTTCCCGTATTT---AGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCC 1774 || || | |||||||| || |||| ||| | |||||||||||||| ||||| Sbjct 13915 ACAGGCCTTCCGTATTTTACCTTGCTGGA---CCAATTGCTTTGGGCCCCCATAAACTCT 13971 Query 1775 TTAAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATGACGTTGTACCAGGCGTCGTTA 1834 |||||||| || || ||||||| ||||||| |||||||| ||| |||||||| | || Sbjct 13972 TTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATTT 14031 Query 1835 CTGTAGACCTTGGGACTTAAGTCTAAGTGTCCACATAGATAGTTATGTGGGCCTAGTGAC 1894 || | || | | || ||||| || || ||||| || |||||||| |||| || Sbjct 14032 GAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGAT 14091 Query 1895 CTAGCCCACATTGTCTTGCCGGTTCGACTGTCTCCCTCAATTACTATACTTTGAGGTC-T 1953 || |||||| |||||| || |||| | || |||||||| || ||||| | |||| | Sbjct 14092 CTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCGT 14151 Query 1954 CAGGGGCCGCGCAGCGGCGTC 1974 | |||||||||||||| || Sbjct 14152 TAATGGCCGCGCAGCGGCATC 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8649685851872