Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_033779.1 Length=2784 Score E Sequences producing significant alignments: (Bits) Value seq19028 284 2e-73 >seq19028 Length=31091 Score = 284 bits (314), Expect = 2e-73 Identities = 734/1116 (66%), Gaps = 77/1116 (7%) Strand=Plus/Plus Query 964 GAATCATACGGAGAACGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGT 1023 || |||||| || || || |||| ||||||| | |||||||| ||||||||||| Sbjct 13080 GACTCATACTGAAAATGCATTGT---TGTATATTAGTTCAACTCATGCATCTAATCCTGT 13136 Query 1024 GTATGCAACATTGAAGATACGCATCTATTTTTATGATGCTGTTACTAATTAATAAATATT 1083 ||| || ||| | ||||| ||||||||||| ||| | |||||||||||||| Sbjct 13137 ATATTGTACTATGAGAACACGCAGTTATTTTTATGAGAGTGTATCAAATTAATAAATATT 13196 Query 1084 GAATTTTATTTCATGATTTTCCGTAACGGAAATTGTGTTTACAAGTACGTTATATAATAC 1143 ||||||||||||||||| ||| || | ||| | ||| ||| || ||||||| Sbjct 13197 GAATTTTATTTCATGATATTCAAGTACATCCACTGTTTGCTCAATTACATTGAATAATAC 13256 Query 1144 ATGATCAACTGCTCTAATTACATTATTAATTGAAATTACTTCTAAATGCTTCAGATGCTT 1203 || || || |||||||| | ||| ||||| ||| || |||| | | | | || Sbjct 13257 ATTGTCTACAGCTCTAATAATATTGTTAATACTAATAACACCTAATCGGTCTAAAAATTT 13316 Query 1204 GAGAACTTGGAATTTAAAGACCCTTAAGAAAAGACCAGTCTGAGGCCGTAAGGTCGTCCA 1263 | || | |||||||| || |||||||||| ||| |||| ||||| |||| Sbjct 13317 CATTACACGAAATTTAAATACTCTTAAGAAAACGTATGTCGGAGGACGTAAACGAGTCCT 13376 Query 1264 GACTTTGAAGTTGAGAAAACATTTGTGAATCCCCAGTGCCCTCCTGAGGTTGTGATTGAA 1323 || ||||||||||| ||| |||||||| |||| || |||| |||||||| ||||| Sbjct 13377 GATCTTGAAGTTGAGGAAAGCTTTGTGAAGATTCAGTTCCTTCCTCAGGTTGTGGTTGAA 13436 Query 1324 CCGTATCTGTAATGTGATGATGTCCTGGTTCATGTTGAA-----TGGCCTGATGTCGTGT 1378 || || |||| | ||| ||||| ||| ||| ||| ||| |||| | ||| Sbjct 13437 TCGAATTTGTATTTCGATTATGTC--GGT---TGTCGAATTTGTTGGTCTGAGATTGTGG 13491 Query 1379 CTTGTTATCGTGAAATATAG-----GGGATTGTTT-----ATCT----CCGAGATAAAC- 1423 | ||| |||||||||| | | | ||| || | || ||||| Sbjct 13492 TTGAGGATCTTGAAATATAGAAACAGCTAATATTTCCCAAATATGTGGTTGACGTAAACG 13551 Query 1424 -----ACGCCATTCTTTGCTTGATGAGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGG 1478 ||||||||| | ||||| |||||||||||| ||||||||||||| ||||||| Sbjct 13552 ACTAGACGCCATTCATCGCTTGTTGAGCAGTGATGTATTCCCCTGTGCGTATATCCATGA 13611 Query 1479 TTGATGCAGTCGATGTGGAGGTAGTATGAACAGCCGCAGTCTAGGTCTACTCGTTTACGT 1538 ||| || | | | |||||| || || ||||||| |||| | | | Sbjct 13612 CCAGAACAGCTAATATTTTTGAATATTGAACATCCACAAGGCAGGTCTAGTCGTCTTCTT 13671 Query 1539 CTCACTGCTTTCTTCTTG----GCCGCTCTGT-------GTTG--TACTTTG-------- 1577 || | | | |||||||| | | | ||| |||| | | ||| Sbjct 13672 CTGATTTGTCTCTTCTTGATATCCGGATATGTAAATGAGGTTGCTTTCCTTGTATAATGT 13731 Query 1578 ----------ATTGG--------TACCTG--TGAACAATGGGTTGT-CGATGGTGACGAA 1616 ||||| | |||| ||| ||| |||||| ||||||| ||| Sbjct 13732 CTATGCATCCATTGGGATAACATTTCCTGCACGAATAAT-GGTTGTGTGATGGTGTAGAA 13790 Query 1617 GATCGCATTTTTAATAGCCCAGGCTCTTAGTGCTGCGtttttttCCTCGTCGAGATATTC 1676 ||||| | | || ||| | ||| | ||||||||||| ||||| | || Sbjct 13791 TTCTGCATTATGCAAAGACCAATTTTTTAATTTAATATTTTTTTCCTCCTCGAGGAACTC 13850 Query 1677 TTTATATGAGGATGTTGGCCCTGGATTGCATAGAAAGATTGTGGGAATCCCGCCTTTAAT 1736 |||||| ||| || || || |||||||| | |||||||| || ||||| || || || Sbjct 13851 TTTATAGCTGGAAGTAGGACCAGGATTGCACAAGAAGATTGTCGGTATCCCACCCTTTAT 13910 Query 1737 TTGGATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCTCGTTGGGCACCCATAAATTC 1796 | | || | ||||| ||| ||||| ||| | | |||||| |||||||| || Sbjct 13911 CTTTACAGGCCTTCCGTATTTTACCTTGCTGGACCAATTGCTTTGGGCCCCCATAAACTC 13970 Query 1797 CTTGAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTGTACCACGCATCGTT 1856 || |||||||||||||| ||||| || |||| |||||||| ||| ||||| |||| || Sbjct 13971 TTTAAAGTGCTTTAGATAATGCGGATCGACGTTATCAATGATGTTATACCAGGCATTATT 14030 Query 1857 GCTGTAGACCTTTGGGCTTAGGTCAAGGTGTCCACATAAGTAGTTATGTGGGCCTAGAGA 1916 || | || | | || | || || |||| ||| |||||||| |||| ||| Sbjct 14031 TGAATAAATTTTATTATTCAAATCTAAATGACCGCATAGGTAATTATGTGGTCCTAAAGA 14090 Query 1917 ACGGGCCCATATGGTCTTCCCGGTCCGGCTTTCTCCCTCAATGACAATACTGTTGGG-CC 1975 | ||||| |||||||| || | || ||||||||||||||||| ||||| | Sbjct 14091 TCTTGCCCACTCTGTCTTCCCTGTTCTAGACTCACCCTCAATGACAATACTCTTGGGTCG 14150 Query 1976 TCCAGGGCCGCGCAGCGGAAGGCATGACGTTCTCAG 2011 | | ||||||||||||| | | | || || |||| Sbjct 14151 TTAATGGCCGCGCAGCGGCATCCCTAACATTTTCAG 14186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8793540909305