Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vaccinium_20macrocarpon_20[genbank_20GCA_5F000775335.1_202014-09-04]
200,203 sequences; 414,621,889 total letters
Query= NC_025475.1
Length=2547
Score E
Sequences producing significant alignments: (Bits) Value
seq42475 77.0 5e-11
seq27506 77.0 5e-11
>seq42475
Length=339
Score = 77.0 bits (84), Expect = 5e-11
Identities = 86/113 (76%), Gaps = 4/113 (4%)
Strand=Plus/Minus
Query 1505 GAAGTAGTTGTGTCTTCCCAGACTTCTGGCCCAACTGGTCTTTCCGGTAC--GACTTGGT 1562
|||||||||||||| ||| |||||||||||||| ||| ||||| || | ||| |||
Sbjct 245 GAAGTAGTTGTGTCGTCCGAGACTTCTGGCCCAGGCGGTTTTTCCCGTTCTTGAC--GGT 188
Query 1563 CCGCAGATGTAGAGGGATCTTCGCCGGAGTTGGAGTTGTTCGGGTTCCTGGTA 1615
|| || ||||||||| || | |||| | | | ||||| |||||||| ||
Sbjct 187 CCTTCGAGGTAGAGGGAGATTGGGCGGATTGGCCGCTGTTCTGGTTCCTGTTA 135
>seq27506
Length=293
Score = 77.0 bits (84), Expect = 5e-11
Identities = 86/113 (76%), Gaps = 4/113 (4%)
Strand=Plus/Plus
Query 1505 GAAGTAGTTGTGTCTTCCCAGACTTCTGGCCCAACTGGTCTTTCCGGTAC--GACTTGGT 1562
|||||||||||||| ||| |||||||||||||| ||| ||||| || | ||| |||
Sbjct 167 GAAGTAGTTGTGTCGTCCGAGACTTCTGGCCCAGGCGGTTTTTCCCGTTCTTGAC--GGT 224
Query 1563 CCGCAGATGTAGAGGGATCTTCGCCGGAGTTGGAGTTGTTCGGGTTCCTGGTA 1615
|| || ||||||||| || | |||| | | | ||||| |||||||| ||
Sbjct 225 CCTTCGAGGTAGAGGGAGATTGGGCGGATTGGCCGCTGTTCTGGTTCCTGTTA 277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8024494255274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |