Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_003493.2 Length=2561 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-28 >seq2 Length=27986743 Score = 134 bits (148), Expect = 2e-28 Identities = 194/273 (71%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 1415 TCCAGTCTTCGTCAGGATTGCAAAGAATTATAGAAGGGATCCCACCTTTTATTTTC--TT 1472 |||| || || || || ||| || ||||| | |||| ||| ||||| |||| | || Sbjct 23095231 TCCAATCCTCATCTGGGTTGGTGAGGATTATGGTGGGGACCCCTCCTTTGATTTGCCTTT 23095290 Query 1473 CTTTTTTCCATATTTAGGGTTGACAGTGAAATCAGACTGGCAACCTATTAATTGCTTCCA 1532 |||||||||||||| |||||||| ||| | || || ||| || || | ||| | Sbjct 23095291 TTTTTTTCCATATTTTGGGTTGACGGTGTAGTCGGATTGGATCCCGATGATGGACTTGAA 23095350 Query 1533 CAATGGGACGAACTTGAAGGGGATGTCGTCGATGATATTATAGGTGGCGTGTTCATCGTA 1592 | | ||||| | | | || ||||| || | || ||||| || || | |||||||| Sbjct 23095351 CGGATGCACGAATTGGCAAGGTATGTCATCCACAATGTTATAAGTTGCTCGCTCATCGTA 23095410 Query 1593 GTTGGTGAAGTCGATGGTCCCGTTCCAGTAGTTGTGTCGCCCGAGACTTCTAGCCCAGGT 1652 ||| |||||||||||| | ||| ||| |||||||| | || ||| ||| ||||| Sbjct 23095411 GTTTGTGAAGTCGATGTTGCCGGCCCAATAGTTGTGCGGTCCAAGAGATCTGGCCCAACA 23095470 Query 1653 GGTCTTTCCGGTACGAGTTGGTCCGCAGATGTA 1685 |||||| ||||| || | ||||| ||||| || Sbjct 23095471 GGTCTTGCCGGTTCGTGAGGGTCCACAGATATA 23095503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8085988538698