Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ziziphus_20jujuba_20[refseq_20GCF_5F000826755.1_202015-02-06] 4,789 sequences; 437,753,511 total letters Query= NC_011058.1 Length=2584 Score E Sequences producing significant alignments: (Bits) Value seq2 116 6e-23 >seq2 Length=27986743 Score = 116 bits (128), Expect = 6e-23 Identities = 190/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 1425 TCCAGTCCTCATCTCTATTTGTTAAAATTATGGAAGGGACACCACCTTTTATTTTC--TT 1482 |||| ||||||||| || || | ||||||| ||||| || ||||| |||| | || Sbjct 23095231 TCCAATCCTCATCTGGGTTGGTGAGGATTATGGTGGGGACCCCTCCTTTGATTTGCCTTT 23095290 Query 1483 CTTTTTTCCATACTTAGGGTTGACAGTGAAGTCGAACTGGCAACCTATTAATTGCTTCCA 1542 ||||||||||| || |||||||| ||| ||||| | ||| || || | ||| | Sbjct 23095291 TTTTTTTCCATATTTTGGGTTGACGGTGTAGTCGGATTGGATCCCGATGATGGACTTGAA 23095350 Query 1543 CAATGGGACGAACTTGAAGGGGATGTCGTCAATGACATTGTAGGTCGCGTGTTCGTCGTA 1602 | | ||||| | | | || ||||| || | | || || || || | || ||||| Sbjct 23095351 CGGATGCACGAATTGGCAAGGTATGTCATCCACAATGTTATAAGTTGCTCGCTCATCGTA 23095410 Query 1603 CGTGGTGAAGTCGATGGTCCCATTCCAGTAGTTGTGTCGTCCGAGGCTTCTAGCCCAGGT 1662 | |||||||||||| | || ||| |||||||| |||| || ||| ||||| Sbjct 23095411 GTTTGTGAAGTCGATGTTGCCGGCCCAATAGTTGTGCGGTCCAAGAGATCTGGCCCAACA 23095470 Query 1663 GGTCTTTCCGGTACGAGTTGGTCCGCAGATGTA 1695 |||||| ||||| || | ||||| ||||| || Sbjct 23095471 GGTCTTGCCGGTTCGTGAGGGTCCACAGATATA 23095503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8159584793700