Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_001420.2 Length=5577 Score E Sequences producing significant alignments: (Bits) Value seq11820 1577 0.0 seq1742936 122 3e-24 >seq11820 Length=5410 Score = 1577 bits (1748), Expect = 0.0 Identities = 2302/3225 (71%), Gaps = 68/3225 (2%) Strand=Plus/Plus Query 462 TAATCGAAGAATTGCAAGAATGCTATGACGTGCTCGGACAACTTGATATTAATAACACTA 521 |||| || |||||| | ||||||| | |||||| |||||||||||||||||||||| Sbjct 1456 TAATGGATGAATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTA 1515 Query 522 TAGACCACAAACCCCTCGGTAATGACCATTGGAACCTCCTCTATGAAAAACCCGTATACA 581 |||||||| ||| || | || | ||| | | || || | || ||| Sbjct 1516 TAGACCACCGCCCCGAAGGGGACGAAAAATGGTTTTTAGAGAACGAGAAGACGGT-TACG 1574 Query 582 AACATTGGTATCA-GCTCGTTTCAAATCGACCCCTTAAAGATATCCGCGCCGATTACAAC 640 | || | || ||| | | | | || || ||||| ||||| |||| || || || Sbjct 1575 CAGTTTTGCCGCAAGCTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTATAAT 1634 Query 641 TATGCAAAGGCTAAGGGTGTTAAAGATGAGTGCTCAAAAATCTTGGAGGAGTCAACTATG 700 || | || || ||| |||| |||||||| |||| | | |||||| || |||||| Sbjct 1635 TACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATG 1694 Query 701 AAGTCTCGACGTGGCTTTACCGTTCAAAGATTAATGAATGCTATGCGTACTGCCCATTCT 760 || || || | |||||| | |||| | || |||||||| ||||| || ||| || Sbjct 1695 AAATCGCGTAGAGGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCT 1754 Query 761 AAGGGCTGGTATGTCGTATTCGATACTCTTACTCTAGCCGATGACCGCTTAAAGGATTTC 820 | || |||| | |||| || || ||||| || | || || ||||| ||| ||| || Sbjct 1755 GATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTT 1814 Query 821 TATGATAATCCCAATGCTCTTCGTGACTACTTCCGTGATATTGGTCGTATGGTGCTTACT 880 |||||||||||||||||| | |||||||| || |||||||||||||||||||| ||| || Sbjct 1815 TATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCT 1874 Query 881 GCCGAAGGTCGCTCGGTGCATGACTCATCTTCCGACTGCTATCAGTATTTTTGTGTGCCA 940 ||||| |||||| || |||| ||| |||||||||||||||||||||||||||| Sbjct 1875 GCCGAGGGTCGCAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCT 1934 Query 941 GAGTATGGTACACAGCACGGTCGTCTACATTTCCACGCAGTGCATCTTATGCGCACACTT 1000 |||||||||||| | || ||||| |||||||| || ||||| ||||||| |||||| Sbjct 1935 GAGTATGGTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTT 1994 Query 1001 CCTCTGGGTTCTCTGCACCCTAACTTCGGTAAGCTGGTACGCATCAATCGGCAAATAAAT 1060 ||| ||| | ||||||| || ||| | |||||||| || || ||||| Sbjct 1995 CCTACAGGTAGCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAAT 2054 Query 1061 AGCTTGCAAAACACGTGGCCTTATGGTTACTCTATGCCCATCGCAGTCCGGTACTCCCAA 1120 ||||||||||| |||||||||||||||||| ||||||||||||||| || ||| | || Sbjct 2055 AGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAG 2114 Query 1121 GACGCATTCTCTCGCGCTGGCTGGCTCTGGCCTGTGGACTCAAAGGGTGAACCCCTTAAA 1180 ||||| || || || |||| ||| | |||||||| || | || ||||| || |||||| Sbjct 2115 GACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAA 2174 Query 1181 GCTACCTCGTATATGGCTGTAGGCTTCTACGTTGCTAAATACGTTAACAAAAAATCAGAT 1240 |||||| ||||||||||| || ||||| || |||||||||||||||||||| |||||| Sbjct 2175 GCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGAT 2234 Query 1241 ATTGACATGGCCGTAAAAGGCCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAA 1300 || ||| | || | ||||| ||||| ||||||||||||||| ||||| |||||||| Sbjct 2235 ATGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAG 2294 Query 1301 ATCAACCTCATACCCAAGAAAGTGTTCAGAATACGAATGTCTCGCAATTTCGGAATGAAA 1360 | || | |||||||| |||||||||| ||||| ||||| ||||| |||||| Sbjct 2295 CTGTCGCTACTTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAA 2354 Query 1361 CTGTTATCAATGGCTCACCTGTCAGCGGAAACCCTGATGGAACTGACCCAAGTGGGTTAC 1420 || | ||||| | | ||||| |||| | | || |||| ||| | |||||||| Sbjct 2355 ATGCTCACAATGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTAC 2414 Query 1421 GACGTGACCCCGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTCAAATCGAGG 1480 |||| ||| ||||||||| | || |||||||||||||| || | |||| | | || |||| Sbjct 2415 GACGCGACGCCGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGG 2474 Query 1481 CTGGCAAAGAAATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACGAATCTGCTA 1540 |||| ||| |||| ||||||||||||| |||||||||||||||||| |||||||| Sbjct 2475 CTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTC 2534 Query 1541 AAATTCATGCGCAATTTGACCCGAACAATCGGAGCGTCCAACCTACAGAGTTTTATCGCT 1600 ||||| |||||| || || || || || | |||||||| ||||||||||||||| Sbjct 2535 AAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCT 2594 Query 1601 TCAATGACCACGAAATTAACAAGTACGGATATTTCTGATGAAACCAAAAACTACGTTGCT 1660 || ||||| ||| |||||| | |||||||||||||||| | ||||| || ||| | Sbjct 2595 TCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGAT 2654 Query 1661 TCTGCAGGAATTGCTGTTGCTAACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAA 1720 ||||||||| || |||| ||||||||||||||||||||||||||||| |||||| Sbjct 2655 AAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAA 2714 Query 1721 TGAGGAAATTCAATCTCAACTTAAAAAACTCGAGGTCGTCTTACTTTGCAACCTTTCGCC 1780 |||| |||||| | || ||| | |||||| ||||||||||| |||||||||| Sbjct 2715 TGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCC 2774 Query 1781 ATCATCTCAACG-TGCTGGCAAAAACTGACGCCCTTGACGAGGAGAAATACTTAAATATG 1839 |||| || |||| | ||| ||||||||||||| | || |||||||| | | |||||| Sbjct 2775 ATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATG 2833 Query 1840 TTAGGTGCTCTCCTCAAGGACTGGTTCCGGTACGAAGAACATTTCGTGCATGGTAAACAA 1899 | || | || ||||||||||||| | || || |||||| || ||||||| | | Sbjct 2834 CTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGAT 2893 Query 1900 TCAATGCTTGACATACTGAAAGAACGTGGCCTATTATCCACATCGTCAACTGACACAAAC 1959 || | ||||||| | ||||| ||||| || |||| || ||| ||| Sbjct 2894 TCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTG--TTCAAC 2951 Query 1960 CAC--AAAGGAAACTGAAATGTCTAAATCAA---AC-GAATCTGCTGTAGCCTTTCAAAC 2013 ||| | ||| || ||||| | | |||| || ||| | ||| || || || Sbjct 2952 CACTAATAGGTAA--GAAAT-CATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGAC 3008 Query 2014 TGCTATCGCTTCTATCAAACTTATTCAAGCATCTTCTGTTCTTGACTTGACAGAGGACGA 2073 ||| | || ||||| || || ||||| || ||| | ||| | || || || || || || Sbjct 3009 CGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGA 3068 Query 2074 TTTTGACTTCTTAACTCGCGACCGTGTCTGGATTGCTACCGACCGTTCACGCGCTCGCCG 2133 ||| || || | || | || || ||||||||||| ||||| || || ||||| || Sbjct 3069 TTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCG 3128 Query 2134 -TGCTATCGAGGCTTGCGTATATGGAACACTGGACTTTGTCGGGTATCCTCGCTTTCCTG 2192 ||| | ||||||||||| ||||| || ||||||||||| || || ||||||||||||| Sbjct 3129 CTGC-GTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTG 3187 Query 2193 CTCCTGTTGAGTTTATTTCTGCCGTCATTGCTTATTACGTTCATCCCGTTAACATCCAAA 2252 ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||| Sbjct 3188 CTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAA 3247 Query 2253 CCGCCTGTCTCATCATGGAAGGTGCTGAGTTTACCGAAAACATCGTCAATGGTGTTGAAC 2312 | |||||||||||||||||||| ||||| ||||| |||||||| | ||||| || || | Sbjct 3248 CGGCCTGTCTCATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGC 3307 Query 2313 GCCCCGTTAAAGCCTCTGAACTGTTCGCCTTCACTCTTCTTGTTCGCGCCGGAAACAAAG 2372 | || ||||||||| ||||| ||||||| || || | | ||| ||||| ||||||| | Sbjct 3308 GTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTG 3367 Query 2373 ATCTTATCGGTCACGCTGAAACAAACATCCGTGAACAGTTACGCGCTCAAGGTGTCATGT 2432 | || | | |||| ||| |||| | ||| || | ||||| || |||| || |||| Sbjct 3368 ACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGT 3427 Query 2433 AAAGACCTTTGATTTTATCGTCTTCACTTTTAAGGAGTT----ATGTAATGAAAAAATCA 2488 || | | | | || | || || | | || | | Sbjct 3428 AATG--------TCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCG 3479 Query 2489 ATTCGCCGCTCTGGTGGCAAATCTAAGGGTGCCCGTCTCTGGTATGTAGGCGGAACACAA 2548 | || | || ||||| ||| || || ||||| ||||||||||| || |||| Sbjct 3480 TTGCGAGGTACTAAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAA 3539 Query 2549 TACTAATCTTTTATGTGGGACCGCGGTCCCACTCTATTTAAGGATACAAAAATGTCTAAC 2608 | ||| || | ||| | ||| ||| || || |||||| || |||||||| Sbjct 3540 TTTTAA--TTGCA---GGGGCTTCGGCCCC---TTACTTGAGGATA-AATTATGTCTAAT 3590 Query 2609 GTTCAAACATCTGCGGACCGTGTACCTCATGACTTATCTCACCTTGTCTTTGAGGCTGGT 2668 ||||||| || || ||| | || |||||| | || || |||| ||| |||||| Sbjct 3591 ATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGT 3650 Query 2669 AAAATTGGCCGCCTCAAAACTATCTCTTGGACGCCTGGTGGTGCTGGTGACTCTTTCGAG 2728 | ||||| || || | || || || || || | | ||||| ||||| |||||| Sbjct 3651 CAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAG 3710 Query 2729 TGTGATATGGTTGGCGCTATTCGTCTGTCCCCTCTTCGTCGTGGCCTCGCTGTTGACTCA 2788 || ||||||||| | ||||| || || | ||||||||||| ||| ||||||| Sbjct 3711 ATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCT 3770 Query 2789 CGCGTTGATATCTTTCCTTTCTATATCCCACACCGTCATATCTACGGTCAGCAGTGGATT 2848 || || || ||| |||| ||| |||| || ||||| | || ||| | ||||||||| Sbjct 3771 ACTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATT 3830 Query 2849 AACTTTATGAAGGATGGCGTTAATGCCTCCCCTCTTCCTCCTGTTACATGCTCCTCTGGT 2908 || || ||||||||||| ||||||||| | ||||| || |||||| | | ||||| Sbjct 3831 AAGTTCATGAAGGATGGTGTTAATGCCACTCCTCTCCCGACTGTTA---ACACTACTGGT 3887 Query 2909 T---GGGACTCTGCTGCTTATCTCGGTACCATTCCGTCTTCTACCCTTAAAGTGCCTAAA 2965 | ||| ||| |||| ||| || || ||| || |||| |||| | ||||| Sbjct 3888 TATATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAG 3947 Query 2966 TTCTTACATCAGGGCTATCTGAATATTTATAATAACTACTTCAAACCGCCTTGGTCTGAT 3025 || |||||| ||| ||||||| ||||| ||||| || ||| |||| || ||| Sbjct 3948 CATTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTG----GAT 4003 Query 3026 GACTTAACTTAC----GCTAACCCATCCAATATGCCT--TC-TGAGGATTATAAATGGGG 3078 | || | | ||| ||||||| | ||| || | || || ||| | | || Sbjct 4004 GCCTGACCGTACCGAGGCTAACC---CTAATGAGCTTAATCAAGATGATGCTCGTTATGG 4060 Query 3079 CGTACGTGTCGCTAACCTTAAATCTATCTGGACTGCGCCACTTCCACCGGATACTCGTAC 3138 | ||| | | || ||| || |||||||| || ||||| || || ||| Sbjct 4061 TTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCT 4120 Query 3139 ATCTGAAAACATGACTACTGGTACATCCACTATTGACATTATGGGCCTTCAAGCCGCATA 3198 ||| | ||||| ||| ||| | |||||||||||||||| || ||||| || || Sbjct 4121 TTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTA 4180 Query 3199 CGCTAAATTACATACGGAACAGGAACGTGATTACTTCATGACCCGTTACCGTGACATTAT 3258 ||||| || ||||| || || |||||||||||||||||| ||||||| ||| |||| Sbjct 4181 TGCTAATTTGCATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCATGATGTTAT 4240 Query 3259 GAAAGAGTTCGGCGGTCATACATCCTATGATGGTGACAATCGTCCTCTTCTGCTCATGCG 3318 || || ||| | || || ||||| | |||||| |||||| | || ||||||| Sbjct 4241 TTCTTCATTTGGAGGTAAAACCTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCG 4300 Query 3319 CTCTGAATTTTGGGCATCTGGCTATGACGTAGACGGTACTGACCAATCTTCTCTCGGTCA 3378 |||| | | ||||||||||||||||| || || || ||||||||| | || | || || Sbjct 4301 CTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAACGTCGTTAGGCCA 4360 Query 3379 ATTCTCTGGTCGCGTTCAGCAGACCTTCAATCACAAAGTCCCACGCTTCTATGTTCCTGA 3438 || |||||||| ||||| ||||||| || || || || || |||| ||||||||| Sbjct 4361 GTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGA 4420 Query 3439 GCATCGCGTAATTATGACTCTGGCGGTTACTCGCTTTCCGCCTACT--CATGAAATGGAA 3496 |||| || || | ||||| ||| || ||| |||||||||||| | ||| || Sbjct 4421 GCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAG 4478 Query 3497 ATGCACTATCTTGTAGGTAAAGAAAACTTAACTTATACCGATATTGCTTGTGACCCTGCA 3556 || || || ||| | ||||| || |||||||||||||||||| | ||||||| Sbjct 4479 ATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTT 4538 Query 3557 CTG-ATGGCTAACCTGCCACCTCGTGAAGTATCCTTAAAAGAATTCTTCC--ACTCCTCA 3613 || ||||| ||| |||| || |||||| | || | || || | |||| || | | Sbjct 4539 TTGTATGGC-AACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGA 4597 Query 3614 CCCGATTCTGCTAAATTCAAAATCGCTGAGGGCCAATGGTATCGT 3658 || ||| || || || || |||||||| || ||||||||| Sbjct 4598 TTCG--TCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGT 4640 Score = 163 bits (180), Expect = 1e-36 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 5095 ACATCACGCGAAAATACTAAGGATACTGTCTATGCTCAAAATGAAATGCTCGCGTATAAC 5154 || |||||| | ||||| || || || ||||| |||||||| ||||| || ||| | Sbjct 672 ACTTCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAA 731 Query 5155 CAAAAAGAGTCTATGTCACGCGTTGGCGCTATTCTCGAAAACACAAGCCTCACCAAACAG 5214 || || ||||||| | ||||||| ||||| | |||||||| | || |||| || Sbjct 732 CAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAA 791 Query 5215 CAACAAACTTCTGAAATTATGCGGCAAATGCTTACTCAGGCTCAAACCGCAGGTCAATAT 5274 || || ||| || |||||||| |||||||||||||| |||||||| || ||||| ||| Sbjct 792 CAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTAT 851 Query 5275 TTTACAAATGACCAAATCAAGGAGCTTACGAGAAAAGTTGGTGCTGATATTGA 5327 ||||| |||||||||||||| || | || | || ||| ||||||| |||| Sbjct 852 TTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 904 Score = 154 bits (170), Expect = 5e-34 Identities = 325/482 (67%), Gaps = 17/482 (4%) Strand=Plus/Plus Query 4563 TATGTTTGGCTCTATCGCTGGCGGTATCGCCTCCGCACTTGCCGGAGGCCTTATGGGTAA 4622 ||||||||| |||| ||||||||||| || || || ||||| || ||| ||| ||| Sbjct 125 TATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAA 184 Query 4623 ATTATTTGGCGGCGGTCAGTCCGCCGACTCTACCGGAATCCAAGGCAACGTCCTTGCTTC 4682 ||| ||||| |||||||| |||| ||| || || ||||| | || |||||| | Sbjct 185 ATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTAC 244 Query 4683 CGACAACAATGTTGTAGGTGCTAATGATGCTGGTATTAAATCTGCTATTCAGGGCTCTAC 4742 ||| |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 245 CGATAACAATACTGTAGGCATGGGTGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAA 304 Query 4743 TGTCCCTAACTCTCAGGAAGCTGCTCCCT-CTGCTATCTCTGGCATCCTTGCCGACTCTG 4801 ||| |||||| || | || || | ||||| | | | ||||| | || | ||| Sbjct 305 TGTTCCTAACCCTGATGAGGCCG-TCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTG 363 Query 4802 G-CAAGCA-----------TGCGCTCTCGTCTCTTACCAATGCTGGTGCAAATAAACTCA 4849 | ||| | | || | | || || ||| | | | |||| | Sbjct 364 GTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGC 423 Query 4850 TGGAGGCTGTCGGCCTTTCT---AAGTCTGCCTCTGACAAGGGCAAGGACACAAAAGACT 4906 | || || || ||| | ||||||||| |||| || || ||||| || || | Sbjct 424 TTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATT 483 Query 4907 ATCTCGCCGCCGCATTCCCCGAGCTCAACCCATGGGAACGTGCTGGTGCTGGCGCTTCTA 4966 |||| || || ||||| || ||||| || | ||||| ||||||||||||| ||||| Sbjct 484 ATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCT 543 Query 4967 GTCCAGGCATGCAAGACGCTGGCTTCCAAAATCAGAAGGAGCTAACCAAGATGCAGCTTG 5026 | | || ||| ||||| || || | ||||| || ||||| || || ||||| || | Sbjct 544 CTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGG 603 Query 5027 AC 5028 || Sbjct 604 AC 605 >seq1742936 Length=245 Score = 122 bits (134), Expect = 3e-24 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 4563 TATGTTTGGCTCTATCGCTGGCGGTATCGCCTCCGCACTTGCCGGAGGCCTTATGGGTAA 4622 ||||||||| |||| ||||||| ||| || || || ||||| || ||| ||| ||| Sbjct 182 TATGTTTGGTGCTATTGCTGGCGCTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAA 123 Query 4623 ATTATTTGGCGGCGGTCAGTCCGCCGACTCTACCGGAATCCAAGGCAACGTCCTTGCTTC 4682 ||| ||||| |||||||| |||| ||| || || ||||| | || || ||| | Sbjct 122 ATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTCGCTAC 63 Query 4683 CGACAACAATGTTGTAGGTGCTAATGATGCTGGTATTAAATCTGCTATTCAGGGCTCTAC 4742 ||| |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 62 CGATAACAATACTGTAGGCATGGGTGATGCTGGTATTAAATCTGCCATTCAAGGCTCTAA 3 Query 4743 TG 4744 || Sbjct 2 TG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17381681072600