Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20pubiflorum_20[genbank_20GCA_5F000582825.1_202013-08-30] 1,818,420 sequences; 1,425,274,558 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq11820 1710 0.0 seq1742936 131 6e-27 >seq11820 Length=5410 Score = 1710 bits (1896), Expect = 0.0 Identities = 2346/3246 (72%), Gaps = 104/3246 (3%) Strand=Plus/Plus Query 653 AAGGGTATTAAGGATGAATGCTCGAAAATCCTTGAGGAATCCACCATGAAATCACGTAGA 712 || |||||||||||||| || || | | | || |||| ||||| |||||||| |||||| Sbjct 1647 AAAGGTATTAAGGATGAGTGTTCAAGATTGCTGGAGGCCTCCACTATGAAATCGCGTAGA 1706 Query 713 GGCTTTACCGTACAAAGACTAATGAATGCTATGCGCACTGCCCACACTGAGGGCTGGTAC 772 |||||| | | || | | |||||||| ||||| || || |||| || |||| Sbjct 1707 GGCTTTGCTATTCAGCGTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTT 1766 Query 773 GTTGTATTCGATACTCTTACTCTCGCCGATGACCGCCTTAAGGATTTCTATGATAATCCC 832 | || || || ||||| || | || || ||||| | ||| || |||||||||||| Sbjct 1767 ATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTTATGATAATCCC 1826 Query 833 AATGCTCTCCGTGACTATTTCCGTGATATTGGTCGTATGGTTCTCACTGCCGAGGGTCGT 892 |||||| | ||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1827 AATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC 1886 Query 893 TCTGTCCATGATTCATCTTCGGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGCACC 952 | |||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct 1887 AAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTA-- 1944 Query 953 CAGC--ACGGCCGTTTACATTTTCACGCAGTGCACCTTATGCGCACACTTCCTCTGGGTT 1010 |||| | |||||| | ||||| || || |||||| ||||||| ||||||||| ||| Sbjct 1945 CAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGACACTTCCTACAGGTA 2004 Query 1011 CTATCGACCCTAACTTTGGCAAGCTGGTGCGTACTAATCGGCAAATAAATAGCTTGCAAA 1070 | |||||||| ||||| | ||| || | | || || ||||||||||||||| Sbjct 2005 GCGTTGACCCTAATTTTGGTCGTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAA 2064 Query 1071 ATACATGGCCCTATGGTTACTCTATGCCCATCGCGGTCCGGTACTCCCAAGACGCATTTT 1130 |||| ||||| ||||||||| |||||||||||| || || ||| | || ||||| |||| Sbjct 2065 ATACGTGGCCTTATGGTTACAGTATGCCCATCGCAGTTCGCTACACGCAGGACGCTTTTT 2124 Query 1131 CGCGCGCTGGCTGGCTCTGGCCCGTTGATACAAAGGGCGAACCTCTTAAAGCTACCTCGT 1190 | || |||| ||| | ||||| |||||| | || || || || |||||||||||| | Sbjct 2125 CACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAGCCGCTTAAAGCTACCAGTT 2184 Query 1191 ATATGGCTGTCGGCTTCTACGTCGCTAAATACGTTAACAAAAAATCAGATATTGACATGG 1250 |||||||||| || ||||| || |||||||||||||||||||| |||||||| ||| | | Sbjct 2185 ATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATATGGACCTTG 2244 Query 1251 CCTCTAAAGGTCTAGGGAATAAAGAATGGAACAATTCACTCAAAACCAAAATCAACCTGC 1310 | ||||||||||||| ||||||||||||||| ||||| |||||||| | || | Sbjct 2245 CTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTAC 2304 Query 1311 TGCCCAAGAAAATTTTTCGCATCAGGATGTCTCGCAACTTCGGAATGAAGCTGCACACAA 1370 | |||||||| | || | ||||| ||| ||||||||||| ||||| ||| ||||| Sbjct 2305 TTCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAA 2364 Query 1371 TGAGTCACCTCTCAGCGGAAACTCTAATCCAACTGACCCAAGTGGGCTACGACGTGACCC 1430 ||| | || || |||| |||||||||| ||| | |||| ||||||| ||| | Sbjct 2365 TGACAAATCTGTCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGC 2424 Query 1431 CGTTCAACAACATCTTGAAGCAGAACGCCAAGAAAGAGCTACGATTGAGGCTGGCAAAGA 1490 |||||||| | || |||||||||||||| || | |||| | |||||||||||| ||| Sbjct 2425 CGTTCAACCAGATATTGAAGCAGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAG 2484 Query 1491 AATCTGTCGCCGACGTTTTGGAGGCGCAACCTGTGACGACCAATCTGCTAAAATTCATGC 1550 |||| ||||||||||||| |||||||||||||||||| |||||||| ||||| |||| Sbjct 2485 TTACTGTAGCCGACGTTTTGGCGGCGCAACCTGTGACGACAAATCTGCTCAAATTTATGC 2544 Query 1551 GCAATTTGACCCGTCAA----ATCGGAGTGTCCAACCTGCAGAGTTTTATCGCTTCAATG 1606 || || || | || || || || |||||||||||||||||||||||||| ||| Sbjct 2545 GCGCTTCGA----TAAAAATGATTGGCGTATCCAACCTGCAGAGTTTTATCGCTTCCATG 2600 Query 1607 ACAACGAAATTAACAAGTATGGATATTTCTGATGAAACCAAAAACTACGTTGATACTGCA 1666 || ||| |||||| | ||||||||||||||| | ||||| || |||||| ||| Sbjct 2601 ACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTTGATAAAGCA 2660 Query 1667 GGAATTACTGCTACTCACTTACGAATTAAATCGAAGTGGACTGCTGGTGGAAAATGAAGA 1726 ||||||||| || || ||||||||||||||||||||||||||||| ||||||||| | Sbjct 2661 GGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAA 2720 Query 1727 AATTCAATCTGAACTTAAAAAATTCGAGAAGCTCTTACTTCGCCACCTTTCGCCATCACC 1786 ||||| | || ||| | ||||||||||||||||| || |||||||||||||| | Sbjct 2721 AATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAAC 2780 Query 1787 TGAACG-TACTGGCAAAGACTGACGCTCTCGACGAGGAAAAATACCTAAATATGCTAGGT 1845 | |||| | ||| |||| |||||||| | || ||||| || | || |||||||| || Sbjct 2781 T-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGC 2839 Query 1846 GCTCTCCTCAAGGACTGGTTCCGTTACGAAGAACATTTCGTACATGGTAAACAATCAATG 1905 | || ||||||||||||| | || || |||||| || ||||||| | | || | Sbjct 2840 ACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTT 2899 Query 1906 CTTGACTTATTAAATGAACGTGGACTATTATC-----CACA---TCAACAACCAACCCAA 1957 ||||| | ||||| || |||||| || |||| | | | |||||| | || Sbjct 2900 GTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGATGCTGTTCAACCA--CTAA 2957 Query 1958 AAGGAAATACAAAATGA---ACTCTAACGAATCTGCTGTTGCCTTCGCTACTGCTCTCGC 2014 ||| || | | |||| | || ||| | || ||| || ||| | || Sbjct 2958 TAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTTTCCAGACCGCTTTGGC 3017 Query 2015 ATCTATCAAGCTCATTCAGGCTTCATCTGTGCTGGACCTGACCGAAGACGACTTCGATTT 2074 ||||| ||||||||||||||||| | || |||| | |||||||| || |||||||| Sbjct 3018 CTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTTCGATTT 3077 Query 2075 CTTAACCCGTGACCGTGTATGGATTGCCACTGACCGCTCCCGTGCTCGCCGCGCTATTGA 2134 | || || || || |||||||| ||||||||||| |||||||| ||| |||| Sbjct 3078 TCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGA 3137 Query 2135 GGCCTGCGTATATGGTACATTGGACTTTGTCGGATACCCTCGCTTTCCTGCTCCTGTTGA 2194 ||| ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 3138 GGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTCCTGTTGA 3197 Query 2195 GTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTAACATCCAGACAGCATGTCT 2254 ||||||||||||||||||||||||||||||||||||||| ||||| || || || ||||| Sbjct 3198 GTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCT 3257 Query 2255 TATTATGGAAGGCGCCGAGTTCACCGAAAATATTATCAATGGTATTGACCAGCCAGTTAA 2314 || ||||||||||| || || || ||||| ||||| ||||| | || | || ||||| Sbjct 3258 CATCATGGAAGGCGCTGAATTTACGGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAA 3317 Query 2315 GGCCGCTGAACTATTCGCTTTTACCCTGCGTGTACGCGCCGGAAACACTGACCATGTTAC 2374 ||||||||| | ||||| |||||| ||||||||||||| |||||||||||| | |||| Sbjct 3318 AGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAACACTGACGTTCTTAC 3377 Query 2375 ACATGCAGAAACTAACGTACGTGAACAATTACGTGCTCAAGGAGTAATGTAATGGCTAAA 2434 | |||||| ||||| ||| || |||||||||| ||||||| |||||||| ||||| Sbjct 3378 TGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAGTGATGTAATGTCTAAA 3437 Query 2435 ---------------GGCTCTCG---TCGGCGTTC---GCCGTCCCG-----CT------ 2462 ||| |||| | | ||| | ||||| || || Sbjct 3438 GGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACTAAAGGC 3497 Query 2463 ----CTAAAGGTGCTCGCCTCTGGTATGTTGGCGGCACACAATTCTAATCTTCTAGGGGC 2518 |||||| ||||| || |||||||| || || |||||| ||| || |||||| Sbjct 3498 AAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAA--TTGCAGGGGC 3555 Query 2519 TTCGGCCCCTCTATTTAAGGATATAAAATGTCTAACGTTCAAACTTCCGCTGACCGCATT 2578 |||||||||| || || |||||| | |||||||| |||||||| ||| || || || Sbjct 3556 TTCGGCCCCT-TACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATG 3614 Query 2579 CCTAACGACCTTTCTCACCTCGTCTTCGAGGCTGGTAAAATCGGCCGTTTAAAAACTATC 2638 || | |||||||| || || | |||| |||||| | || || ||| | | || || Sbjct 3615 CCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATT 3674 Query 2639 TCCTGGACTCCAGTTGTCGCTGGCGACTCATTTGAAACTGAGATGGTAGGCGCTATTCGC 2698 || ||||| ||| ||||||||||||| || || | || || |||||| | || Sbjct 3675 TCAACTACTCCGGTTATCGCTGGCGACTCCTTCGAGATGGACGCCGTTGGCGCTCTCCGT 3734 Query 2699 CTTTCTCCACTCCGTCGCGGCCTTGCCGTCGACTCTCGCGTGGATATCTTCTCTTTCTAT 2758 ||||||||| | ||||| |||||||| | |||||| || || || || |||| ||| Sbjct 3735 CTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTACTGTAGACATTTTTACTTTTTAT 3794 Query 2759 ATTCCGCATCGTCATATCTATGGTCAAGAATTCATTGAATTCATGAAAGCTGGCGTTAAT 2818 | || |||||||| | |||||| || | | ||| | |||||||| | ||| |||||| Sbjct 3795 GTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAAT 3854 Query 2819 GCCACTCCTCTCGCACCTGTT---ACTACTGCCTCTGGCTGGGATGCTTCTGCCTATCTT 2875 |||||||||||| | ||||| ||||||| | | || | | || | |||| Sbjct 3855 GCCACTCCTCTCCCGACTGTTAACACTACTGGTTAT---ATTGACCATGCCGCTTTTCTT 3911 Query 2876 GGCACTATTCCATCCTCAAACC-TCAAGGTTCCTAAATTCTTACATCAAGGATACCTTAA 2934 ||||| ||| | ||| | ||| || | ||||| || ||| || || | || Sbjct 3912 GGCACGATT-AACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAA 3970 Query 2935 TATTTACAACAACTACTTTAAGCCACCGTGGGATG-CTGACCTTACATACGCTAACCCAT 2993 ||| || |||||||| ||||| | |||| ||||| |||||| ||| | ||||||| Sbjct 3971 TATCTATAACAACTATTTTAAAGCGCCGT-GGATGCCTGACCGTACCGAGGCTAACC--- 4026 Query 2994 CTAACATGCCTGAACAGGATTA---TAAATGGGGCGTTCG-TGTCGCTAACTTAAAATCT 3049 |||| || | | || ||| | | | || | || || || | || |||| | Sbjct 4027 CTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTTCCGTTGCTGCCATCTCAAAAAC- 4085 Query 3050 ATCTGGACCGCCCCCTTACCTCCTAACTCTAAAACATCAGAGACTATGACCACTGGCGCT 3109 || ||||| || || | |||||| | || | || ||||| ||| | Sbjct 4086 ATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACC 4145 Query 3110 ACGTCTATTGATATTATGGGCCTGCAAGCTGCTTATGCTAAATTGCACACCCAACAAGAA 3169 || |||||||| |||||||| |||||||||||||||||||| ||||| || | |||||| Sbjct 4146 ACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGCATACTGACCAAGAA 4205 Query 3170 CGTGACTACTTCATGACTCGCTATCGCGATATTATGAAAGACTTCGGAGGTCACACCTCC 3229 ||||| ||||||||| || || | ||| |||| || |||||| | ||||| Sbjct 4206 CGTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGTAAAACCTCT 4265 Query 3230 TATGACGGTGATAACCGTCCTCTGCTGCTTATGCGCTCTGAATTTTGGGCCTCTGGCTAT 3289 ||||||| ||| ||||||||| | || | ||||||||| | | ||||| ||||||||| Sbjct 4266 TATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTAT 4325 Query 3290 GACGTCGACGGTACTGACCAATCCTCTTTAGGTCAGTTCTCCGGTCGCGTCCAACAAACA 3349 || || || || ||||||||| | || ||||| ||||| || ||||| || ||||| || Sbjct 4326 GATGTTGATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACC 4385 Query 3350 TTCAATCACAAAGTACCTCGCTTCTATGTACCTGAACACGGCGTCATTATGACTCTCGCC 3409 | || || || || || |||| ||| ||||| || ||| || | ||||| || Sbjct 4386 TATAAACATTCTGTGCCGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCG 4445 Query 3410 GTTACTCGCTTCCCTCCTACT--CATGAAATGGAGATGCACTATCTTGTCGGTAAAGAAT 3467 || ||| || || |||||| | ||| ||||| || || ||| || ||||| Sbjct 4446 CTTGTTCGTTTTCCGCCTACTGCGACTAAA--GAGATTCAGTACCTTAACGCTAAAGGTG 4503 Query 3468 CTTTAACCTATACCGACCTCGCCTGCGACCCTGCTCT-TATGGCTAACCTGCCTCCGCGC 3526 |||| || |||||||| | || ||||||||| | | |||||| ||| |||| ||||| Sbjct 4504 CTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTGTATGGC-AACTTGCCGCCGCGT 4562 Query 3527 GAAGTATCCCTTAAGGAATTCTTCCACTCCTCGCCGGACTCCGCT---AAGTTCAAAATT 3583 ||| | || | ||||| | |||| | || | || || || ||||| || ||| Sbjct 4563 GAAATTTCTATGAAGGATGTTTTCC-GTTCTGG--TGATTCGTCTAAGAAGTTTAAGATT 4619 Query 3584 GCCGAGGGCCAATGGTATCG-CACGCAGCCT--GACCGCGTCGCATTCCCTTATAACGCA 3640 || ||||| || |||||||| | || |||| | | || | | ||||| || Sbjct 4620 GCTGAGGGTCAGTGGTATCGTTATGC-GCCTTCGTATGTTTCTCCT--GCTTATCACCTT 4676 Query 3641 CTTGACGGCTTTCCTTTCTACTC-TGCTCTGCCGTCTACTGACTTAAAACAACGTGTCCT 3699 ||||| ||||| || ||| | || | | ||| ||| ||| || || |||| || || Sbjct 4677 CTTGAAGGCTTCCCATTC-ATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACT 4735 Query 3700 AGTTAACACTGATAACTACGACGAAATCTTTCAGTCTATGCAACTCGCACACTGGAATAT 3759 || | || | || ||| | || ||||| | || | || ||||||| Sbjct 4736 TATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAG 4795 Query 3760 GCAAACTAAATTTAATACTACCGTCTATAGACATATGCCTACGACTCGTGATTCAATCAT 3819 || |||||||||| ||||| ||| | || |||| || ||||| ||||||||||| Sbjct 4796 TCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCAT 4855 Query 3820 GACGTC 3825 ||| || Sbjct 4856 GACTTC 4861 Score = 176 bits (194), Expect = 2e-40 Identities = 361/527 (69%), Gaps = 31/527 (6%) Strand=Plus/Plus Query 4417 TTCCCTTAATCAGGTAAACAAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTC 4475 ||| || |||||||| | || || | | |||||| || ||||| | |||| ||| Sbjct 66 TTCGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT- 124 Query 4476 TCTATGTTTGGTGCAATCGCTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAAC 4535 |||||||||||| || ||||||||||| || || |||||||||| || ||| Sbjct 125 --TATGTTTGGTGCTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCT 182 Query 4536 AAAGCCTTTGGGGGCGGTCAATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCT 4595 ||| ||||| ||||||||| ||| |||| |||| ||||||||||||| || ||| Sbjct 183 AAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCT 242 Query 4596 TC---TGACAATAACGTA---ATCGGTGCTAATGATGCTGGTATCAAATCCGCTATTCAA 4649 | | |||||| ||| || || |||||||||||| ||||| || |||||| Sbjct 243 ACCGATAACAATACTGTAGGCATGGG------TGATGCTGGTATTAAATCTGCCATTCAA 296 Query 4650 GGCTCTAATCCACCCAATGGCCAACAAGCTGCTCCCAATGCTATTTCGGGCGTTCTCGCT 4709 ||||||||| || || | | || | || | | | |||| || | | | ||| Sbjct 297 GGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCT 356 Query 4710 GACACTGGCAAA-GACGCCCT--ATCTTCAAT-CA--CTGGC---GCTGGCGT---TAAT 4757 | |||| ||| ||| | | | | | | || ||||| ||| ||| | || Sbjct 357 AAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGAT 416 Query 4758 AAACTTATGGAAAAAATCGGACTATCT---AAAACTGCTGCTGATAAAGGCAAGGACACA 4814 || | | || | ||||| | || |||| ||||||||||| ||||| || Sbjct 417 AAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACT 476 Query 4815 AAGGATTATCTTGCTTCTGCATTCCCCGACCTCAACCCGTGGGAACGTGCTGGCGCTGGT 4874 |||||||||||| ||||||| || || || || | ||||| |||||||| |||| | Sbjct 477 CGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGAT 536 Query 4875 GCTTCGTCTGCTGGCATGGTTGACGCTGGCTTCCAAAACCAAAAAGA 4921 ||||| |||||||| ||||||||||| || || | || |||||||| Sbjct 537 GCTTCCTCTGCTGGTATGGTTGACGCCGGATTTGAGAATCAAAAAGA 583 Score = 167 bits (184), Expect = 8e-38 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 5013 TCCCGGCAAAATACTAAGGATGCTGTCTATGCTCAAAACGAGATGCTCGAATATAACCAA 5072 || || || ||||| || || || ||||| ||||| |||||||| | ||| | || Sbjct 675 TCACGCCAGAATACGAAAGACCAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAG 734 Query 5073 AAAGAATCTATGTCACGCGTTGGCTCTATTCTCGAAAACACAAGCCTCACCAAACAACAA 5132 || || |||| | ||||||| |||||| | |||||||| | || |||| ||||| Sbjct 735 AAGGAGTCTACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAG 794 Query 5133 CAAACTTCTGAAATTATGCGGCAGATGCTTACTCAAGCTCAAACCGCAGGTCAACATTTT 5192 || ||| || |||||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 795 CAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCAAACGGCTGGTCAGTATTTT 854 Query 5193 ACAAATGACCAAATCAAAGAACTTACACGAAAAGTTGGTGCTGATATTGA 5242 || |||||||||||||||||| | || || || ||| ||||||| |||| Sbjct 855 ACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGA 904 >seq1742936 Length=245 Score = 131 bits (144), Expect = 6e-27 Identities = 180/249 (72%), Gaps = 16/249 (6%) Strand=Plus/Minus Query 4417 TTCCCTTAATCAGGTAAACAAGGAAGTAACCGTTCTCCAACCTCTTAAATAAGGT-ATTC 4475 ||| || |||||||| | || || | | |||||| || ||||| | |||| ||| Sbjct 241 TTCGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATT- 183 Query 4476 TCTATGTTTGGTGCAATCGCTGGCGGTATCGCCTCATCTCTTGCTGGCGGACTCATCAAC 4535 |||||||||||| || ||||||| ||| || || |||||||||| || ||| Sbjct 182 --TATGTTTGGTGCTATTGCTGGCGCTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCT 125 Query 4536 AAAGCCTTTGGGGGCGGTCAATCCGCCTCCTCTACTGGCGTTCAAGGTGATGTCCTCGCT 4595 ||| ||||| ||||||||| ||| |||| |||| ||||||||||||| |||||| Sbjct 124 AAATTGTTTGGAGGCGGTCAAAAAGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTCGCT 65 Query 4596 TC---TGACAATAACGTA---ATCGGTGCTAATGATGCTGGTATCAAATCCGCTATTCAA 4649 | | |||||| ||| || || |||||||||||| ||||| || |||||| Sbjct 64 ACCGATAACAATACTGTAGGCATGGG------TGATGCTGGTATTAAATCTGCCATTCAA 11 Query 4650 GGCTCTAAT 4658 ||||||||| Sbjct 10 GGCTCTAAT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17096272740300