Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hordeum_20vulgare_20subsp._20vulgare_20[genbank_20GCA_5F000326125.1_ 202012-11-15] 2,077,901 sequences; 1,779,486,241 total letters Query= NC_025454.1 Length=7679 Score E Sequences producing significant alignments: (Bits) Value seq1864375 163 1e-36 >seq1864375 Length=773 Score = 163 bits (180), Expect = 1e-36 Identities = 126/146 (86%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 5884 TTGATCTGGCGGTAGAGGTGGGGCGTGGGTAGGATTTCGGGCGGTTGTCGCACGGCCAGT 5943 |||| ||||||||||||||||||||||| |||||| || || ||||||||||||||||| Sbjct 773 TTGACCTGGCGGTAGAGGTGGGGCGTGGATAGGATCTCCGGTCGTTGTCGCACGGCCAGT 714 Query 5944 GCGGCTGGCGGGACCGAGCAGCGGGTATGACCACAAAGG--CGTCCAC-CCTGCGCCACA 6000 ||||||||||||||||||||||||||| ||||| | | | | ||| ||| |||||| Sbjct 713 GCGGCTGGCGGGACCGAGCAGCGGGTACGACCAGGTACGTACATACACAGCTG-GCCACA 655 Query 6001 AGCAAACACCCCCTCTCTTGCAAGCC 6026 |||||||||||||||||||||||| Sbjct 654 TCCAAACACCCCCTCTCTTGCAAGCC 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 23885869695652