Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_001331.1
Length=7349
Score E
Sequences producing significant alignments: (Bits) Value
seq51305 96.9 2e-16
seq81104 78.8 4e-11
>seq51305
Length=2180
Score = 96.9 bits (106), Expect = 2e-16
Identities = 71/82 (87%), Gaps = 2/82 (2%)
Strand=Plus/Minus
Query 6886 GGTCAAGGGCCGCGCTCCCGGCTCGTCGG--AACAGCTTCACCGTTCCGGCGAACGGAAG 6943
||||| ||||||||| ||||||||||||| || |||||||| |||||||||||| |
Sbjct 229 GGTCAGGGGCCGCGCCCCCGGCTCGTCGGGGAAGCGCTTCACCTCCCCGGCGAACGGAGG 170
Query 6944 CACGGGCGGAGCGCACCCTTGA 6965
|||||||| |||||||||||||
Sbjct 169 CACGGGCGAAGCGCACCCTTGA 148
>seq81104
Length=2477
Score = 78.8 bits (86), Expect = 4e-11
Identities = 115/157 (73%), Gaps = 8/157 (5%)
Strand=Plus/Minus
Query 6886 GGTCAAGGGCCGCGCTCCCGGCTCGTCGGAACAGCTTCACCGTTCCGGCGAACGGAAGCA 6945
||||| ||||||||| ||||||||||||| || || |||||||||||| |||
Sbjct 1467 GGTCAGGGGCCGCGCCCCCGGCTCGTCGGTGAGGCA----CGAGCCGGCGAACGGAGGCA 1412
Query 6946 CGGGCGGAGCGCACCCTTGAACGCCTCCCCCCTGAAACAGCCTCCG-CTTGGGAGTGTGG 7004
|||||| ||||||||||||| | | || | || || ||||| || ||||| | ||
Sbjct 1411 CGGGCGAAGCGCACCCTTGACCAGCCCCGATCAAAATCACTCTCCGCCTGGGGAGCG-GG 1353
Query 7005 GGCAGCTTCTCCGCCCCGCGCTCCCGAGCACTCGGCG 7041
| ||||| | | |||||| | ||| || |||| ||
Sbjct 1352 GAGAGCTT-TACCCCCCGCAC-CCCTGGCCCTCGCCG 1318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 23362337790088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |