Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15] 11,786 sequences; 334,384,427 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq11651 904 0.0 >seq11651 Length=504 Score = 904 bits (1002), Expect = 0.0 Identities = 503/504 (99%), Gaps = 0/504 (0%) Strand=Plus/Plus Query 181 GCGACCTTTCGCCATCAACTAACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGACCTTTCGCCATCAACTAACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAAG 60 Query 241 TGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTT 120 Query 301 CATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGAT 180 Query 361 GCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT 240 Query 421 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCG 300 Query 481 AAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTG 360 Query 541 CTCGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTGGGATACCCTCGCT 600 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 361 CTCGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTCGCT 420 Query 601 TTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCAACA 480 Query 661 TTCAAACGGCCTGTCTCATCATGG 684 |||||||||||||||||||||||| Sbjct 481 TTCAAACGGCCTGTCTCATCATGG 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17120992658990