Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15] 11,786 sequences; 334,384,427 total letters Query= NC_007817.1 Length=5486 Score E Sequences producing significant alignments: (Bits) Value seq11651 315 2e-82 >seq11651 Length=504 Score = 315 bits (348), Expect = 2e-82 Identities = 376/507 (74%), Gaps = 15/507 (3%) Strand=Plus/Plus Query 1768 GCCACCTTTCGCCATCACCTGAACG-TACTGGCAAAGACTGACGCTCTCGACGAGGAAAA 1826 || |||||||||||||| || |||| | ||| |||| |||||||| | || ||||| || Sbjct 1 GCGACCTTTCGCCATCAACT-AACGATTCTGTCAAAAACTGACGCGTTGGATGAGGAGAA 59 Query 1827 ATACCTAAATATGCTAGGTGCTCTCCTCAAGGACTGGTTCCGTTACGAAGAACATTTCGT 1886 | || |||||||| || | || ||||||||||||| | || || |||||| || Sbjct 60 GTGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGT 119 Query 1887 ACATGGTAAACAATCAATGCTTGACTTATTAAATGAACGTGGACTATTATCCACATCAA- 1945 ||||||| | | || | ||||| | ||||| || |||||| || |||| || Sbjct 120 TCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATCTGAGTCCGA 179 Query 1946 -------CAACCAACCCAAAAGGAAATACAAAATGA---ACTCTAACGAATCTGCTGTTG 1995 |||||| | || ||| || | | |||| | || ||| | || Sbjct 180 TGCTGTTCAACCA--CTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTAC 237 Query 1996 CCTTCGCTACTGCTCTCGCATCTATCAAGCTCATTCAGGCTTCATCTGTGCTGGACCTGA 2055 ||| || ||| | || ||||| ||||||||||||||||| | || |||| | | Sbjct 238 GTTTCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAA 297 Query 2056 CCGAAGACGACTTCGATTTCTTAACCCGTGACCGTGTATGGATTGCCACTGACCGCTCCC 2115 ||||||| || |||||||| | || || || || |||||||| ||||||||||| | Sbjct 298 CCGAAGATGATTTCGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTC 357 Query 2116 GTGCTCGCCGCGCTATTGAGGCCTGCGTATATGGTACATTGGACTTTGTCGGATACCCTC 2175 ||||||| ||| ||||||| ||||| |||||||| |||||||||| |||||||||| Sbjct 358 GTGCTCGTCGCTGCGTTGAGGCTTGCGTTTATGGTACGCTGGACTTTGTAGGATACCCTC 417 Query 2176 GCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTTA 2235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 418 GCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTATTATGTTCATCCCGTCA 477 Query 2236 ACATCCAGACAGCATGTCTTATTATGG 2262 |||| || || || ||||| || |||| Sbjct 478 ACATTCAAACGGCCTGTCTCATCATGG 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17440951407990