Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_013027.1 Length=2782 Score E Sequences producing significant alignments: (Bits) Value seq3686 127 4e-26 >seq3686 Length=1607 Score = 127 bits (140), Expect = 4e-26 Identities = 132/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 632 GCCTGGGCAGAAGCCGGTATGGATGCTTATCCTAAAGATCCACGAACCAAATTCTGGGAC 691 ||||||| |||||||||| | || |||||| ||||||||||| | |||||||| ||||| Sbjct 9 GCCTGGGAAGAAGCCGGTCTCGAAGCTTATTCTAAAGATCCAAGGACCAAATTTTGGGAT 68 Query 692 GGCTATCGAGATCAAAAGCATGTTGTCGTTGATGAATTTCGAGGAGCTATTGACATCTCC 751 || ||| || ||| ||||||| | ||||||||||||||| ||| |||||| Sbjct 69 GGGTATTCAGGTCAGGGAACTGTTGTCCTCGATGAATTTCGAGGAAGTATCGACATCAGT 128 Query 752 CATATACTTAGATGGCTCGATCGGTACCCTACTCTTGTGGAGATCAAAGGATC 804 || | || ||||||||||| ||||||| || |||||| |||| || || Sbjct 129 CACCTCCTGCGATGGCTCGATAAGTACCCTGTTCGAGTGGAGGTCAAGGGTTC 181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8790002248135