Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_023427.1 Length=2668 Score E Sequences producing significant alignments: (Bits) Value seq3686 87.8 3e-14 >seq3686 Length=1607 Score = 87.8 bits (96), Expect = 3e-14 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 710 GAAGCTGGTATCGACGCTTACTATAAAGACCCTAGGACGAAATTCTGGTGCGGTTATCGC 769 ||||| ||| |||| ||||| | |||||| || ||||| ||||| ||| || ||| Sbjct 18 GAAGCCGGTCTCGAAGCTTATTCTAAAGATCCAAGGACCAAATTTTGGGATGGGTATTCA 77 Query 770 GGTCAACAACATGTTATTGTCGATGAATTTCGAGGTGCTATCGACATCTCCCACCTGCTT 829 ||||| | |||| | |||||||||||||||| |||||||||| ||||| || Sbjct 78 GGTCAGGGAACTGTTGTCCTCGATGAATTTCGAGGAAGTATCGACATCAGTCACCTCCTG 137 Query 830 AGATGGCTTGACCGGTACCCT 850 ||||||| || ||||||| Sbjct 138 CGATGGCTCGATAAGTACCCT 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8428429506828