Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_023428.1 Length=2398 Score E Sequences producing significant alignments: (Bits) Value seq3686 150 3e-33 >seq3686 Length=1607 Score = 150 bits (166), Expect = 3e-33 Identities = 145/186 (78%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 657 TGCATGGGAACAAGCCGGTATGGATGCTTATTGTAAAGATCCAAGATCCAAGTTCTGGGA 716 ||| |||||| |||||||| | || ||||||| |||||||||||| |||| || ||||| Sbjct 8 TGCCTGGGAAGAAGCCGGTCTCGAAGCTTATTCTAAAGATCCAAGGACCAAATTTTGGGA 67 Query 717 TGGCTATTGTAGTCAGGAAAATGTTGTTATCGATGAATTTAGAGGAGGGATTGACATCTC 776 ||| |||| |||||| || |||||| ||||||||||| ||||| | || |||||| Sbjct 68 TGGGTATTCAGGTCAGGGAACTGTTGTCCTCGATGAATTTCGAGGAAGTATCGACATCAG 127 Query 777 CCACATTCTTAGATGGCTCGACAGGTACCCGGTACGAGTGGAAATCAAAGGATCTTCCAG 836 ||| | || |||||||||| | |||||| || |||||||| |||| || || || | Sbjct 128 TCACCTCCTGCGATGGCTCGATAAGTACCCTGTTCGAGTGGAGGTCAAGGGTTCATCAAT 187 Query 837 GCCACT 842 ||||| Sbjct 188 CCCACT 193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7564467484488