Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_025722.1 Length=2834 Score E Sequences producing significant alignments: (Bits) Value seq3686 122 2e-24 >seq3686 Length=1607 Score = 122 bits (134), Expect = 2e-24 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 630 GCCTGGGACGAAGCGGGCGTCGAAGCTTATTCTAAAGACCCAAGGTCTAAGTTCTGGTGT 689 |||||||| ||||| || ||||||||||||||||||| |||||| | || || ||| | Sbjct 9 GCCTGGGAAGAAGCCGGTCTCGAAGCTTATTCTAAAGATCCAAGGACCAAATTTTGGGAT 68 Query 690 GGTTATCAAGGTCAATCAAACGTTGTGCTCGATGAATTTCGAGGAGGAATCGATGTGGCC 749 || ||| |||||| || ||||| |||||||||||||||||| | ||||| | Sbjct 69 GGGTATTCAGGTCAGGGAACTGTTGTCCTCGATGAATTTCGAGGAAGTATCGACATCAGT 128 Query 750 CACCTCCTCAGGTGGTTCGACCGTTATCCTGTGCGTGTGGAGATCAAAGG 799 |||||||| | ||| |||| || ||||| || |||||| |||| || Sbjct 129 CACCTCCTGCGATGGCTCGATAAGTACCCTGTTCGAGTGGAGGTCAAGGG 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8956394718795