Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_026262.1 Length=2478 Score E Sequences producing significant alignments: (Bits) Value seq3686 84.2 3e-13 >seq3686 Length=1607 Score = 84.2 bits (92), Expect = 3e-13 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1611 GAACCTTTGACTTCGACAACAACGGGGTATCGATCGAACCATCGTAAGAGGTGTGCGACA 1670 ||||| ||||| || || ||| ||||| ||||| |||||| | |||||| || Sbjct 181 GAACCCTTGACCTCCACTCGAACAGGGTACTTATCGAGCCATCGCAGGAGGTGACTGATG 122 Query 1671 TCAATTCCACCGCGGAACTCGTCGATAACAACGTGTCGATGACTGCGGTAACCGTCCCAA 1730 || || | || || || || |||| ||||| || |||| || || |||||| Sbjct 121 TCGATACTTCCTCGAAATTCATCGAGGACAACAGTTCCCTGACCTGAATACCCATCCCAA 62 Query 1731 AATTTGGTGCGAGGATCTTTAGGGAAAGCGTCCATACCCGCTTCTGCCCAGGCTCG 1786 |||||||| | |||||||||| |||| || | ||| |||||| ||||||| || Sbjct 61 AATTTGGTCCTTGGATCTTTAGAATAAGCTTCGAGACCGGCTTCTTCCCAGGCACG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7820456231848