Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_026277.1 Length=2711 Score E Sequences producing significant alignments: (Bits) Value seq3686 82.4 1e-12 >seq3686 Length=1607 Score = 82.4 bits (90), Expect = 1e-12 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 1819 ACTGGGTACCGATCCAGCCATCGTAAAAAGTGCGAGACATCGATTCCACCTCGAAATTCA 1878 || |||||| ||| |||||||| | | ||| || ||||| | |||||||||||| Sbjct 160 ACAGGGTACTTATCGAGCCATCGCAGGAGGTGACTGATGTCGATACTTCCTCGAAATTCA 101 Query 1879 TCGATGACAACATGTTCATGACCTCGATAGCCGCACCAAAATTTACTGCGCGGACACTTA 1938 |||| ||||||| | | |||||| ||| || ||||||||| | | ||| ||| Sbjct 100 TCGAGGACAACAGTTCCCTGACCTGAATACCCATCCCAAAATTTGGTCCTTGGATCTTTA 41 Query 1939 GGGTAAGCGTCCAGTCCAGCTTCGGCCCAAGCACG 1973 | ||||| || || || ||||| |||| ||||| Sbjct 40 GAATAAGCTTCGAGACCGGCTTCTTCCCAGGCACG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8566023458534