Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_026625.1 Length=2656 Score E Sequences producing significant alignments: (Bits) Value seq3686 102 1e-18 >seq3686 Length=1607 Score = 102 bits (112), Expect = 1e-18 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1655 GACGAACCTTTAACCTCGACGACCACAGGATATCGGTCGAACCAGCGGAGGAGATGGGCG 1714 || ||||| || ||||| || ||||| || |||| ||| || ||||| || | Sbjct 184 GATGAACCCTTGACCTCCACTCGAACAGGGTACTTATCGAGCCATCGCAGGAGGTGACTG 125 Query 1715 ACATCGATTCCACCTCGAAACTCGTCGATAACAACGTTTTCGTGACCTCGGTAGCCATCC 1774 | ||||| | |||||||| || |||| ||||| || | |||||| || |||||| Sbjct 124 ATGTCGATACTTCCTCGAAATTCATCGAGGACAACAGTTCCCTGACCTGAATACCCATCC 65 Query 1775 CAAAACTTGGTCCGAGGATCCTTAGGGAAAGCGTCGAGACCAGCTTCATTCCAGGC 1830 ||||| ||||||| ||||| |||| |||| |||||||| ||||| | |||||| Sbjct 64 CAAAATTTGGTCCTTGGATCTTTAGAATAAGCTTCGAGACCGGCTTCTTCCCAGGC 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8390031194724