Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_030455.1 Length=3021 Score E Sequences producing significant alignments: (Bits) Value seq3686 91.5 3e-15 >seq3686 Length=1607 Score = 91.5 bits (100), Expect = 3e-15 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 772 TCGTCGTGCTTGGGATGAAGCGGGAGAAGGTGCTTACTCTAAGTGTCCACGATCCAAGTT 831 || |||||| ||||| ||||| || | ||||| ||||| |||| | |||| || Sbjct 2 TCATCGTGCCTGGGAAGAAGCCGGTCTCGAAGCTTATTCTAAAGATCCAAGGACCAAATT 61 Query 832 TTGGGATGGCTATCAAGATCAAGAACATGTTGTCATTGATGAATTTCGAGGAGGTATTGA 891 ||||||||| ||| || ||| | | ||||||| | ||||||||||||||| |||| || Sbjct 62 TTGGGATGGGTATTCAGGTCAGGGAACTGTTGTCCTCGATGAATTTCGAGGAAGTATCGA 121 Query 892 TGTGGCGCACCTGCTTCGATGGTTTGATCGTTATCCGGTCCGTGTGGA 939 | ||||| || |||||| | ||| || || || || ||||| Sbjct 122 CATCAGTCACCTCCTGCGATGGCTCGATAAGTACCCTGTTCGAGTGGA 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9554767642130