Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Marchantia_20polymorpha_20subsp._20ruderalis_20[genbank_20GCA_5F0016 41455.1_202016-05-10] 4,137 sequences; 205,718,403 total letters Query= NC_030474.1 Length=2854 Score E Sequences producing significant alignments: (Bits) Value seq3686 84.2 4e-13 >seq3686 Length=1607 Score = 84.2 bits (92), Expect = 4e-13 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 993 CGAGCCTGGGAAGAAGCCGGAATCAGTGCTTATCCTAAAGACCCCCGGTCCAAGTTTTGG 1052 || ||||||||||||||||| || |||||| ||||||| || || |||| |||||| Sbjct 6 CGTGCCTGGGAAGAAGCCGGTCTCGAAGCTTATTCTAAAGATCCAAGGACCAAATTTTGG 65 Query 1053 GATGGGTACCGTAGCCATGAGTCGGTGGTTATCGATGAATTTCGGGGCGGCATTGATATA 1112 |||||||| | || | | || || ||||||||||||| || | || || || Sbjct 66 GATGGGTATTCAGGTCAGGGAACTGTTGTCCTCGATGAATTTCGAGGAAGTATCGACATC 125 Query 1113 TCCCATATGCTCCGATGGTTGGATCGGCACCCTGTTATTGTAGAAGTAAAGGGT 1166 || | || |||||| | ||| | |||||||| || || || |||||| Sbjct 126 AGTCACCTCCTGCGATGGCTCGATAAGTACCCTGTTCGAGTGGAGGTCAAGGGT 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 9020391822895