Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Astrammina_20rara_20[genbank_20GCA_5F000211355.2_202011-04-27] 3,231 sequences; 1,450,095 total letters Query= NC_027799.1 Length=1600 Score E Sequences producing significant alignments: (Bits) Value seq1250 82.4 8e-13 >seq1250 Length=217 Score = 82.4 bits (90), Expect = 8e-13 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 1182 TCAATGTGCGATTCTGGTTGTCTAATAAAAGTGACAGACCAAATGTAATGTACAAAGCAT 1241 |||| || |||| ||||| || |||||| || ||||| ||||||||||| ||| | Sbjct 83 TCAACGTAAGATTTTGGTTATCAAATAAACTAGATAGACCCAATGTAATGTATAAACTCT 142 Query 1242 ACCTTTTTTGGTACGATACCGGAGCAACTCTATCGGATACCTTTAATTATTTTACAAATA 1301 | | |||||||||||| |||||||||| || ||| | | | ||| || ||| | Sbjct 143 ATTTGTTTTGGTACGATGTCGGAGCAACTTTAGATGATGCGTATTGTTACTTCACACAAT 202 Query 1302 CTAATAAAATGATAG 1316 | ||||||||| ||| Sbjct 203 CAAATAAAATGTTAG 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5011027968636