Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq11070 87.8 1e-13 seq31095 86.0 3e-13 >seq11070 Length=608 Score = 87.8 bits (96), Expect = 1e-13 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 6896 GTCGTTGACGTTGGCGGCCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCATCCAC 6955 ||||| |||||||| ||||| | || || ||||| |||| || | | ||||| Sbjct 65 GTCGTGCACGTTGGCTGCCGTCACGACGGCGCTGTGCGCCAGGCCGGTCTTGCTGTCCAC 124 Query 6956 ACCAATGTGCGCTTTCATGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTC 7015 || |||||| |||| ||||| |||||| || ||||| ||||||||||||||| Sbjct 125 GCCGATGTGCAGCTTCAGTCCGAAGAACCACTGCTTGCCTTTGCGGGTCTGGTGCATCTC 184 Query 7016 TGGGTCACGCTTGCCGCTGCCATTCTTGGTCGAACTGGGCGCGGCAATCAGCGAGGCGTC 7075 ||| |||| | | || | ||||||||||| || |||| | || | | |||||| Sbjct 185 GCCGTCGCGCTCGACCTTGTCGTTCTTGGTCGAGCTCGGCGACGAGATGATGGTGGCGTC 244 Query 7076 GACCACCGTGC 7086 ||| | |||| Sbjct 245 GACGATGGTGC 255 >seq31095 Length=655 Score = 86.0 bits (94), Expect = 3e-13 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 6913 CCGTGCCCACTACGGTGTGCACCAGCCCCGAGTCCGCATCCACACCAATGTGCGCTTTCA 6972 |||| |||| || ||||| ||||||| | | |||||||| |||||| |||| Sbjct 1 CCGTCACCACAGCGCTGTGCGCCAGCCCGGTTTGGCTGTCCACACCGATGTGCAGCTTCA 60 Query 6973 TGCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTCTGGGTCACGCTTGCC-- 7030 ||||||||| ||| || | ||||| ||||| ||||| || ||||||||| ||| Sbjct 61 TGCCGAAATACCATTGCTGGCCTTTGCGAGTCTGATGCATGTCGGGGTCACGC--GCCTT 118 Query 7031 GCTGCCATTCTTGGTCGAACTGGGCGCGGCAAT 7063 | | | |||||||| ||||||||||| || || Sbjct 119 GTCGGCGTTCTTGGTAGAACTGGGCGCTGCGAT 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27312379281040