Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_007364.1 Length=865 Score E Sequences producing significant alignments: (Bits) Value seq5558 277 1e-71 seq5289 197 7e-48 >seq5558 Length=218 Score = 277 bits (306), Expect = 1e-71 Identities = 192/218 (88%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 387 GATAAAAGAATTATCCTTAAAGCAAATTTCTCAGTTCTATTTGATCAACTAGAGACATTA 446 || || ||||| || || || || || ||||| || ||||||||||||| || |||||| Sbjct 1 GACAAGAGAATAATACTCAAGGCGAACTTCTCTGTCTTATTTGATCAACTGGAAACATTA 60 Query 447 GTCTCTCTGAGGGCATTCACAGAAAGTGGTGCTATTGTGGCTGAAATATTTCCCATTCCC 506 ||||| |||||||| |||||||| ||| || ||||| |||||||||| ||||||||| Sbjct 61 GTCTCACTGAGGGCTTTCACAGACGATGGCGCCATTGTAGCTGAAATATCTCCCATTCCT 120 Query 507 TCCGTACCAGGACATTTTACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGA 566 ||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCCATGCCAGGACATTCTACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGA 180 Query 567 CTTGAATGGAATGATAACTCAATTCGAGCGTCTGAAAA 604 |||||||||||||||||||||||||||||||||||||| Sbjct 181 CTTGAATGGAATGATAACTCAATTCGAGCGTCTGAAAA 218 >seq5289 Length=259 Score = 197 bits (218), Expect = 7e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 402 CTTAAAGCAAATTTCTCAGTTCTATTTGATCAACTAGAGACATTAGTCTCTCTGAGGGCA 461 || ||||| || ||| || | || |||| ||| |||||| || | || ||||| Sbjct 257 CTGAAAGCGAACTTCAGTGTGATCTTCGATCGACTGGAGACACTAATACTACTCAGGGCT 198 Query 462 TTCACAGAAAGTGGTGCTATTGTGGCTGAAATATTTC-CCATTCCCTCCG-TACCAGGAC 519 ||||| ||| || || ||||| | ||||| ||||| ||||| ||| | | ||||||| Sbjct 197 TTCACTGAAGAAGGAGCAATTGTCGGTGAAA-ATTTCACCATTGCCTTCTCTTCCAGGAC 139 Query 520 ATTTTACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGACTTGAATGGAATG 579 || | ||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 138 ATACTGATGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATG 79 Query 580 ATAACTCAATTCGAGCGTCTGAAAATATACAGAGATTCGCTTGGGGAATCCATGATGAGA 639 ||||| || |||||| ||||||| | ||||||||||||||||| ||| | | ||||| Sbjct 78 ATAACACAGTTCGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGG 19 Query 640 ATGGGGGACCTTCACTCC 657 ||||| ||||| |||||| Sbjct 18 ATGGGAGACCTCCACTCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2662243034048