Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_007370.1 Length=890 Score E Sequences producing significant alignments: (Bits) Value seq5289 351 5e-94 seq5558 167 1e-38 >seq5289 Length=259 Score = 351 bits (388), Expect = 5e-94 Identities = 231/254 (91%), Gaps = 1/254 (0%) Strand=Plus/Minus Query 415 TGAAAGCGAATTTCAGTGTGATTTTTGACCGACTAGAGACCATAGTATTACTAAGGGCTT 474 |||||||||| ||||||||||| || || ||||| ||||| || || |||| ||||||| Sbjct 256 TGAAAGCGAACTTCAGTGTGATCTTCGATCGACTGGAGACACTAATACTACTCAGGGCTT 197 Query 475 TCACCGAAGAGGGAGCAATTGTTGGCGAAA-TCTCACCATTGCCTTCTTTTCCAGGACAT 533 |||| ||||| ||||||||||| || |||| | ||||||||||||||| ||||||||||| Sbjct 196 TCACTGAAGAAGGAGCAATTGTCGGTGAAAATTTCACCATTGCCTTCTCTTCCAGGACAT 137 Query 534 ACTATTGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGAT 593 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 136 ACTGATGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGAT 77 Query 594 AACACAGTTCGAGTCTCTAAAAATCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGAAT 653 |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| || Sbjct 76 AACACAGTTCGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGGAT 17 Query 654 GGGGGACCTCCACT 667 ||| |||||||||| Sbjct 16 GGGAGACCTCCACT 3 >seq5558 Length=218 Score = 167 bits (184), Expect = 1e-38 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 417 AAAGCGAATTTCAGTGTGATTTTTGACCGACTAGAGACCATAGTATTACTAAGGGCTTTC 476 || ||||| ||| ||| | ||||| | ||| || || |||| | ||| ||||||||| Sbjct 19 AAGGCGAACTTCTCTGTCTTATTTGATCAACTGGAAACATTAGTCTCACTGAGGGCTTTC 78 Query 477 ACCGAAGAGGGAGCAATTGTTGGCGAAATCTCACCATTGCCTTCTTTTCCAGGACATACT 536 || || || || || ||||| | ||||| || || | ||||| | ||||||||| || Sbjct 79 ACAGACGATGGCGCCATTGTAGCTGAAATATCTCCCATTCCTTCCATGCCAGGACATTCT 138 Query 537 ATTGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGATAAC 596 | ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 139 ACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGACTTGAATGGAATGATAAC 198 Query 597 ACAGTTCGAGTCTCTAAAAA 616 || |||||| ||| |||| Sbjct 199 TCAATTCGAGCGTCTGAAAA 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2742238317523