Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_007380.1 Length=838 Score E Sequences producing significant alignments: (Bits) Value seq5289 376 1e-101 seq5558 158 6e-36 >seq5289 Length=259 Score = 376 bits (416), Expect = 1e-101 Identities = 237/255 (93%), Gaps = 1/255 (0%) Strand=Plus/Minus Query 389 TGAAAGCGAATTTCAGTGTGATTTTTGACCGGCTAGAGACCCTAATATTACTAAGGGCTT 448 |||||||||| ||||||||||| || || || || ||||| |||||| |||| ||||||| Sbjct 256 TGAAAGCGAACTTCAGTGTGATCTTCGATCGACTGGAGACACTAATACTACTCAGGGCTT 197 Query 449 TCACCGAAGAGGGAGCAATTGTTGGCGAAA-TTTCACCATTGCCTTCTCTTCCAGGACAT 507 |||| ||||| ||||||||||| || |||| ||||||||||||||||||||||||||||| Sbjct 196 TCACTGAAGAAGGAGCAATTGTCGGTGAAAATTTCACCATTGCCTTCTCTTCCAGGACAT 137 Query 508 ACTATTGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGAT 567 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 136 ACTGATGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGAT 77 Query 568 AACACAGTTCGAGTCTCTAAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGAAT 627 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 76 AACACAGTTCGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGGAT 17 Query 628 GGGAGACCTCCACTC 642 ||||||||||||||| Sbjct 16 GGGAGACCTCCACTC 2 >seq5558 Length=218 Score = 158 bits (174), Expect = 6e-36 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 373 GATAAGAACATCATGTTGAAAGCGAATTTCAGTGTGATTTTTGACCGGCTAGAGACCCTA 432 || |||| || || | || ||||| ||| ||| | ||||| | || || || || Sbjct 1 GACAAGAGAATAATACTCAAGGCGAACTTCTCTGTCTTATTTGATCAACTGGAAACATTA 60 Query 433 ATATTACTAAGGGCTTTCACCGAAGAGGGAGCAATTGTTGGCGAAATTTCACCATTGCCT 492 | | ||| ||||||||||| || || || || ||||| | ||||| || || | ||| Sbjct 61 GTCTCACTGAGGGCTTTCACAGACGATGGCGCCATTGTAGCTGAAATATCTCCCATTCCT 120 Query 493 TCTCTTCCAGGACATACTATTGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGA 552 || | ||||||||| ||| ||||||||||||||||||||||| |||||||||| ||| Sbjct 121 TCCATGCCAGGACATTCTACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGA 180 Query 553 CTTGAATGGAATGATAACACAGTTCGAGTCTCTAAAA 589 |||||||||||||||||| || |||||| ||| ||| Sbjct 181 CTTGAATGGAATGATAACTCAATTCGAGCGTCTGAAA 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2575848127895