Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_026428.1 Length=841 Score E Sequences producing significant alignments: (Bits) Value seq5289 334 4e-89 seq5558 138 6e-30 >seq5289 Length=259 Score = 334 bits (370), Expect = 4e-89 Identities = 228/255 (89%), Gaps = 1/255 (0%) Strand=Plus/Minus Query 389 TGAAAGCAAATTTCAGTGTGATTTTCAATCGGCTTGAAGCCCTGATACTACTTAGAGCTT 448 ||||||| || ||||||||||| ||| |||| || || | || |||||||| || |||| Sbjct 256 TGAAAGCGAACTTCAGTGTGATCTTCGATCGACTGGAGACACTAATACTACTCAGGGCTT 197 Query 449 TTACGGAAGAAGGAGCAATTGTAGGCGAAA-TCTCACCATTACCTTCTCTTCCAGGACAT 507 | || ||||||||||||||||| || |||| | |||||||| |||||||||||||||||| Sbjct 196 TCACTGAAGAAGGAGCAATTGTCGGTGAAAATTTCACCATTGCCTTCTCTTCCAGGACAT 137 Query 508 ACTGACAAGGATGTCAAAAATGCAATTGAGATCCTCATCGGAGGATTTGAATGGAATGAT 567 ||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||||| Sbjct 136 ACTGATGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAATGAT 77 Query 568 AACACAGTTCGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGCGATGAGGAT 627 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 76 AACACAGTTCGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAGGAT 17 Query 628 GGGAGATCTCCACTC 642 |||||| |||||||| Sbjct 16 GGGAGACCTCCACTC 2 >seq5558 Length=218 Score = 138 bits (152), Expect = 6e-30 Identities = 124/153 (81%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 438 ACTTAGAGCTTTTACGGAAGAAGGAGCAATTGTAGGCGAAATCTCACCATTACCTTCTCT 497 ||| || ||||| || || || || || ||||||| ||||| || || | ||||| | Sbjct 66 ACTGAGGGCTTTCACAGACGATGGCGCCATTGTAGCTGAAATATCTCCCATTCCTTCCAT 125 Query 498 TCCAGGACATACTGACA-AGGATGTCAAAAATGCAATTGAGATCCTCATCGGAGGATTTG 556 ||||||||| || ||| ||||||||||||||||||||| ||||||||||| ||| ||| Sbjct 126 GCCAGGACATTCT-ACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGACTTG 184 Query 557 AATGGAATGATAACACAGTTCGAGTCTCTGAAA 589 |||||||||||||| || |||||| ||||||| Sbjct 185 AATGGAATGATAACTCAATTCGAGCGTCTGAAA 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2585447561912