Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxoplasma_20gondii_20[genbank_20GCA_5F000256705.1_202012-03-27] 5,717 sequences; 63,046,945 total letters Query= NC_026432.1 Length=863 Score E Sequences producing significant alignments: (Bits) Value seq5289 334 4e-89 seq5558 145 4e-32 >seq5289 Length=259 Score = 334 bits (370), Expect = 4e-89 Identities = 229/257 (89%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 386 TACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTGATACTACTAAGGG 445 |||||||||||||||||||||| ||||| | ||| | ||||| | |||||||| |||| Sbjct 259 TACTGAAAGCGAACTTCAGTGTGATCTTCGATCGACTGGAGACACTAATACTACTCAGGG 200 Query 446 CTTTCACTGAGGAGGGAGCAATAGTTGGAGAAA-TTTCACCATTACCTTCTCTTCCAGGA 504 |||||||||| || |||||||| || || |||| |||||||||| ||||||||||||||| Sbjct 199 CTTTCACTGAAGAAGGAGCAATTGTCGGTGAAAATTTCACCATTGCCTTCTCTTCCAGGA 140 Query 505 CATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAATGGAAT 564 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 139 CATACTGATGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAATGGAAT 80 Query 565 GGTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAACTGTGATGAG 624 | |||||| |||||||||||||||| | ||||||||||||||||||||| | || ||||| Sbjct 79 GATAACACAGTTCGAGTCTCTGAAACTCTACAGAGATTCGCTTGGAGAAGCAGTAATGAG 20 Query 625 AATGGGAGACCTTCACT 641 ||||||||||| |||| Sbjct 19 GATGGGAGACCTCCACT 3 >seq5558 Length=218 Score = 145 bits (160), Expect = 4e-32 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 373 GAAAAGAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGACCTTG 432 || |||| ||| |||| || ||||||||| ||| | ||| | | | | || || || Sbjct 1 GACAAGAGAATAATACTCAAGGCGAACTTCTCTGTCTTATTTGATCAACTGGAAACATTA 60 Query 433 ATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCT 492 | ||| ||||||||||| || || || || || || | ||||| || || | ||| Sbjct 61 GTCTCACTGAGGGCTTTCACAGACGATGGCGCCATTGTAGCTGAAATATCTCCCATTCCT 120 Query 493 TCTCTTCCAGGACATACTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGA 552 || | ||||||||| || |||||||||||||||||| |||| |||||||||| ||| Sbjct 121 TCCATGCCAGGACATTCTACAGAGGATGTCAAAAATGCAATTGGAATCCTCATCGGTGGA 180 Query 553 CTTGAATGGAATGGTAACACGGTTCGAGTCTCTGAAAA 590 ||||||||||||| |||| | |||||| |||||||| Sbjct 181 CTTGAATGGAATGATAACTCAATTCGAGCGTCTGAAAA 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2655843411370