Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_007367.1
Length=1027
Score E
Sequences producing significant alignments: (Bits) Value
seq2206 123 2e-25
seq2854 75.2 7e-11
>seq2206
Length=2790
Score = 123 bits (136), Expect = 2e-25
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 136 AGATCTTGAGGCTCTCATGGAATGGCTAAAGACAAGACCAATTCTGTCACCTCTGACTAA 195
|| |||| ||||||||| |||| || ||||||||||| ||||||| || || | ||||||
Sbjct 2789 AGTTCTTAAGGCTCTCAGGGAAGGGATAAAGACAAGAACAATTCTCTCGCCACGGACTAA 2730
Query 196 GGGGATTTTGGGGTTTGTGTTCACGCTCACCGTGCCCAGTGAGCGAGGACTGCAGCGTAG 255
|||||||| |||| ||| | |||| |||| |||||||| | | |||||| | || |
Sbjct 2729 AGGGATTTTAGGGTCTGTTATAACGCAAACCGGGCCCAGTGTGTGTGGACTGTATAGTTG 2670
Query 256 ACGCTTTGTCCAAAATGCCCTCAATGGGAATGGAGATCCAAATAACATGGACAAAGCAGT 315
| | ||||| ||||| ||| ||| |||| | | ||||| | ||| |||| | |
Sbjct 2669 ATGATTTGTAAAAAATTTCCTTTATGAAAATGAAAAAAATAATAAAAAGGAAAAAGTAAT 2610
Query 316 TAAACTGTATA 326
| |||| ||||
Sbjct 2609 TTAACTATATA 2599
>seq2854
Length=1624
Score = 75.2 bits (82), Expect = 7e-11
Identities = 73/94 (78%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 584 AAGGCTATGGAGCAAATGGCTGGATCAAGTGAGCAGGCAGCGGAGGCCATGGAAATTGCT 643
|||| ||| ||| ||| || | ||||||||||||||| |||| ||| | |||||| | |
Sbjct 1623 AAGGATATAGAGAAAAAGGTTAGATCAAGTGAGCAGGAAGCGAAGGAAAGGGAAATAGAT 1564
Query 644 AGTCAGGCCAGGCAAATGGTGCAGGCAATGAGAG 677
|| |||||||| |||| | | ||| ||| ||||
Sbjct 1563 AGAAAGGCCAGGAAAATAGAGAAGGAAATAAGAG 1530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3180673121864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |