Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blastomyces_20percursus_20[genbank_20GCA_5F001883805.1_202016-11-18]
3,868 sequences; 32,310,953 total letters
Query= NC_007380.1
Length=838
Score E
Sequences producing significant alignments: (Bits) Value
seq905 87.8 9e-15
seq3766 78.8 5e-12
>seq905
Length=6285
Score = 87.8 bits (96), Expect = 9e-15
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 60 ACAAGTTGTAGACCAAGAACTAGGTGATGCCCCATTCCTTGATCGGCTTCGCCGAGATCA 119
|| || ||||| |||| ||| ||||||| |||||||| || |||| || | | | ||
Sbjct 205 ACTAGGTGTAGTCCAAATACTGAGTGATGCACCATTCCTAGAACGGCATCAACAAAAGCA 146
Query 120 GAAGTCCCTAAGGGGAAGAGGCAGCACTCTCGATCTAGACATCGAAGCAGCCACCCGTGT 179
|| || | ||||||||| | || | | | ||||||| |||||||||||| |||
Sbjct 145 GAGGTTACAAAGGGGAAGTGACAATAATAAGAAAAAAGACATCAAAGCAGCCACCCATGT 86
Query 180 TGGAAAGCAGATAGTAGAGAGGATTCTGAAGGAAGAATCCGATGAGGCACTTAAAATGAC 239
|||||| | || || | |||| | | |||||| || |||| | ||||||||||
Sbjct 85 TGGAAACCGAATGTTATTAAATATTCGGGAAGAAGAAAGGGAGGAGGTATTTAAAATGAC 26
Query 240 CAT 242
||
Sbjct 25 AAT 23
>seq3766
Length=11604
Score = 78.8 bits (86), Expect = 5e-12
Identities = 71/87 (82%), Gaps = 2/87 (2%)
Strand=Plus/Minus
Query 133 GGAAGAGGCAGCACTCTCGATCTAGACATCGAAGCAGCCACCCGTGTTGGAAAGCAGATA 192
|||||||||| |||||| ||||| |||| ||||||||||| || ||||||||| ||
Sbjct 11533 GGAAGAGGCAATTCTCTCGGTCTAGTCATCAGAGCAGCCACCCATGGTGGAAAGCAAATT 11474
Query 193 GTAG-AGAGGATTCTGAAGGAAGAATC 218
|||| ||||| ||| | | ||||||||
Sbjct 11473 GTAGAAGAGG-TTCGGGAAGAAGAATC 11448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2575897246580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |