Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798715.1_202014-12-08] 5,935 sequences; 52,505,057 total letters Query= NC_030871.1 Length=7747 Score E Sequences producing significant alignments: (Bits) Value seq1104 140 2e-29 >seq1104 Length=22801 Score = 140 bits (154), Expect = 2e-29 Identities = 563/875 (64%), Gaps = 34/875 (4%) Strand=Plus/Plus Query 2259 TCTGATCCTGCAAGACTGATAGAAAAAGAAAGAGAACAAAAGTATGAAGCTCGATTATTC 2318 || |||||| |||| ||||| || ||||||||||| ||| || || |||||||| Sbjct 21171 TCCGATCCTTGTCGACTTATAGAGAAGGAAAGAGAACAGAAGATCGAGGCACGATTATTT 21230 Query 2319 GGTAATGCAGAACTTGAAAATAAGCATTCACTGAGTCTTGTGGCAGCAAGAATG--AAGA 2376 | |||||||| || ||||| ||| |||||| | || ||| ||| | |||| Sbjct 21231 GCAAATGCAGAGCTGACCAATAAACATAGCCTGAGTGTAGTCGCATT--GAAGGCAAAGA 21288 Query 2377 AGGCACTATCCTATTTCGACGAACAACTGATGACACCTACAGACAAGAAAAGAAAAGCGC 2436 | | || |||||| || ||| ||||||| || || || ||| | || | Sbjct 21289 AAGTTCTGAGTTATTTCACGGAGCAATTGATGACGCCGACTGATAAGCGCCGCAAGGAAA 21348 Query 2437 TAATCCATGAAGCCTCAAGAGAATTATCGTTCGAGTCTAAT---TACTCACTATTACTCG 2493 |||||||||| ||| |||||||| | || | ||| || || | ||| | | Sbjct 21349 TAATCCATGAGATGTCACAAGAATTATTGC---AGCCAAATCGGTATTCTATGTTATTGG 21405 Query 2494 ATATAGAGGGTCACAACCAGTCCATGCAATATGGAAATAC-TCATGAGCTTGCAGAATTT 2552 | ||||| || || ||||| || |||| ||| | |||||| ||| || || || || Sbjct 21406 AAATAGAAGGCCATAACCAATCGATGCCATACGAAAATACATCA-GAACTCAGCGAGTTC 21464 Query 2553 CTCGGCAATCTCTTTGGATTTGACGGTTGGGGTGATATTTCTCACTANNNNNNNNAAT-- 2610 | || ||| | | ||| || || |||||||| | | | || ||| Sbjct 21465 ATTGGTAATTTATATGGCAAGGAGGGGTGGGGTGAGTTGCCAAATTATTTCTC--AATGC 21522 Query 2611 TAACTGTATATCATTATGATGAATATCTGGATCAAGTGATTGAGTC-CGAGGGTCAATTT 2669 || ||| || || ||| |||| || ||| |||| | || | ||| || ||| | Sbjct 21523 TACATGTCTACCACTATAATGAGTACACAGATGAAGTTGT-GACTAGCGAAGGCCAACTG 21581 Query 2670 GGTGGAATAGAAGGTTGGATGAATCCTTTTTGGACTTTACACACATTGATCATGATGAAA 2729 |||||||| || |||||| |||| || | |||||||| || ||| | ||||||||| Sbjct 21582 GGTGGAATTGAGGGTTGGTTGAACCCGGTGTGGACTTTGCATACAACATTAATGATGAAA 21641 Query 2730 TTATTACGGTACATGACAGACATCTCCGTGAAGACAATCATGGTGTATTCCGATGATGTC 2789 || | || |||| ||| | | | || | || ||||| |||||||| Sbjct 21642 CTAATGCGAATCATGGAAGATGTAGAATTAATCTCACTTGCTGTCTATTCTGATGATGTG 21701 Query 2790 AATGCAATAATAGAGATTAAACAGCCTTCAG--AACCGATGGTTAAATCTA-----TATT 2842 || | ||| || |||| | ||| || ||| | ||| | |||| Sbjct 21702 AACGGTATA-------TTCAACATACGTCAAGCAAGCGAATCTAGCATCCAGGCATTATT 21754 Query 2843 TGCAAAGATCATGAAACATTGCAGCAAATTCGGGATGACAGTGAAGTATTCCCAAACAAC 2902 || || || | ||||| | ||||||||||||| || ||| |||||||| | Sbjct 21755 TGAGAAAATAACAGGTCATTGTCGTAAATTCGGGATGATTGTTAAGATATCCCAAACTGC 21814 Query 2903 CCTTTCGAAACACAGAGTAACCATGTTGAGGCAACATTATGCAGATGGTGTGAGAGCAGA 2962 | || || ||| |||| || ||| |||||||||| ||||| || ||| |||||| || Sbjct 21815 ATTATCTAAGCACCGAGTGACTATGCTGAGGCAACACTATGCTGACGGTCAGAGAGCTGA 21874 Query 2963 TTCAACGTTGAAGCGCTTGATATCAGTGAGTGCTGGCAACAA-CCCCACTATCGTGTCTG 3021 ||| ||||||||| | | | || || || ||| || || ||| | | |||| Sbjct 21875 TTCGACGTTGAAGAGGATCCTTTCTGTCAGCTCTGCAAATAATGGACAC-GTGTTCTCTG 21933 Query 3022 ATGAACTAGAAATTGCTGGAATTTGCTCGTCAGCATCTTCTGCAATGGAACTGAGCAATC 3081 | || |||| | || || | ||||||||||| || || | ||| ||||||| Sbjct 21934 AGGAGTTAGAGGTGAGCGGGATATCATCGTCAGCATCGTCCGCCCTCGAATTGAGCAACA 21993 Query 3082 ACCATGAAGCTTGTGCCTACTTGAAAAATTACAAG 3116 ||||||| | ||| | || | || ||||| ||| Sbjct 21994 ACCATGAGGTATGTTCGTATATAAAGAATTATAAG 22028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24673552467740