Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Erysiphe_20necator_20[genbank_20GCA_5F000798735.1_202014-12-08] 6,224 sequences; 50,658,153 total letters Query= NC_030871.1 Length=7747 Score E Sequences producing significant alignments: (Bits) Value seq4300 140 2e-29 >seq4300 Length=2134 Score = 140 bits (154), Expect = 2e-29 Identities = 563/875 (64%), Gaps = 34/875 (4%) Strand=Plus/Plus Query 2259 TCTGATCCTGCAAGACTGATAGAAAAAGAAAGAGAACAAAAGTATGAAGCTCGATTATTC 2318 || |||||| |||| ||||| || ||||||||||| ||| || || |||||||| Sbjct 729 TCCGATCCTTGTCGACTTATAGAGAAGGAAAGAGAACAGAAGATCGAGGCACGATTATTT 788 Query 2319 GGTAATGCAGAACTTGAAAATAAGCATTCACTGAGTCTTGTGGCAGCAAGAATG--AAGA 2376 | |||||||| || ||||| ||| |||||| | || ||| ||| | |||| Sbjct 789 GCAAATGCAGAGCTGACCAATAAACATAGCCTGAGTGTAGTCGCATT--GAAGGCAAAGA 846 Query 2377 AGGCACTATCCTATTTCGACGAACAACTGATGACACCTACAGACAAGAAAAGAAAAGCGC 2436 | | || |||||| || ||| ||||||| || || || ||| | || | Sbjct 847 AAGTTCTGAGTTATTTCACGGAGCAATTGATGACGCCGACTGATAAGCGCCGCAAGGAAA 906 Query 2437 TAATCCATGAAGCCTCAAGAGAATTATCGTTCGAGTCTAAT---TACTCACTATTACTCG 2493 |||||||||| ||| |||||||| | || | ||| || || | ||| | | Sbjct 907 TAATCCATGAGATGTCACAAGAATTATTGC---AGCCAAATCGGTATTCTATGTTATTGG 963 Query 2494 ATATAGAGGGTCACAACCAGTCCATGCAATATGGAAATAC-TCATGAGCTTGCAGAATTT 2552 | ||||| || || ||||| || |||| ||| | |||||| ||| || || || || Sbjct 964 AAATAGAAGGCCATAACCAATCGATGCCATACGAAAATACATCA-GAACTCAGCGAGTTC 1022 Query 2553 CTCGGCAATCTCTTTGGATTTGACGGTTGGGGTGATATTTCTCACTANNNNNNNNAAT-- 2610 | || ||| | | ||| || || |||||||| | | | || ||| Sbjct 1023 ATTGGTAATTTATATGGCAAGGAGGGGTGGGGTGAGTTGCCAAATTATTTCTC--AATGC 1080 Query 2611 TAACTGTATATCATTATGATGAATATCTGGATCAAGTGATTGAGTC-CGAGGGTCAATTT 2669 || ||| || || ||| |||| || ||| |||| | || | ||| || ||| | Sbjct 1081 TACATGTCTACCACTATAATGAGTACACAGATGAAGTTGT-GACTAGCGAAGGCCAACTG 1139 Query 2670 GGTGGAATAGAAGGTTGGATGAATCCTTTTTGGACTTTACACACATTGATCATGATGAAA 2729 |||||||| || |||||| |||| || | |||||||| || ||| | ||||||||| Sbjct 1140 GGTGGAATTGAGGGTTGGTTGAACCCGGTGTGGACTTTGCATACAACATTAATGATGAAA 1199 Query 2730 TTATTACGGTACATGACAGACATCTCCGTGAAGACAATCATGGTGTATTCCGATGATGTC 2789 || | || |||| ||| | | | || | || ||||| |||||||| Sbjct 1200 CTAATGCGAATCATGGAAGATGTAGAATTAATCTCACTTGCTGTCTATTCTGATGATGTG 1259 Query 2790 AATGCAATAATAGAGATTAAACAGCCTTCAG--AACCGATGGTTAAATCTA-----TATT 2842 || | ||| || |||| | ||| || ||| | ||| | |||| Sbjct 1260 AACGGTATA-------TTCAACATACGTCAAGCAAGCGAATCTAGCATCCAGGCATTATT 1312 Query 2843 TGCAAAGATCATGAAACATTGCAGCAAATTCGGGATGACAGTGAAGTATTCCCAAACAAC 2902 || || || | ||||| | ||||||||||||| || ||| |||||||| | Sbjct 1313 TGAGAAAATAACAGGTCATTGTCGTAAATTCGGGATGATTGTTAAGATATCCCAAACTGC 1372 Query 2903 CCTTTCGAAACACAGAGTAACCATGTTGAGGCAACATTATGCAGATGGTGTGAGAGCAGA 2962 | || || ||| |||| || ||| |||||||||| ||||| || ||| |||||| || Sbjct 1373 ATTATCTAAGCACCGAGTGACTATGCTGAGGCAACACTATGCTGACGGTCAGAGAGCTGA 1432 Query 2963 TTCAACGTTGAAGCGCTTGATATCAGTGAGTGCTGGCAACAA-CCCCACTATCGTGTCTG 3021 ||| ||||||||| | | | || || || ||| || || ||| | | |||| Sbjct 1433 TTCGACGTTGAAGAGGATCCTTTCTGTCAGCTCTGCAAATAATGGACAC-GTGTTCTCTG 1491 Query 3022 ATGAACTAGAAATTGCTGGAATTTGCTCGTCAGCATCTTCTGCAATGGAACTGAGCAATC 3081 | || |||| | || || | ||||||||||| || || | ||| ||||||| Sbjct 1492 AGGAGTTAGAGGTGAGCGGGATATCATCGTCAGCATCGTCCGCCCTCGAATTGAGCAACA 1551 Query 3082 ACCATGAAGCTTGTGCCTACTTGAAAAATTACAAG 3116 ||||||| | ||| | || | || ||||| ||| Sbjct 1552 ACCATGAGGTATGTTCGTATATAAAGAATTATAAG 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 24673472242496