Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08] 1,231 sequences; 31,415,732 total letters Query= NC_030697.1 Length=9808 Score E Sequences producing significant alignments: (Bits) Value seq942 80.6 2e-11 seq153 78.8 6e-11 seq140 78.8 6e-11 seq40 78.8 6e-11 >seq942 Length=6590 Score = 80.6 bits (88), Expect = 2e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 6506 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 6565 Query 9727 aaaaaCAAGAGGATATGAA 9745 ||||| || | || | ||| Sbjct 6566 AAAAAAAAAAAGAAAAGAA 6584 >seq153 Length=918 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 839 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 898 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 899 AAAAAAAA 906 >seq140 Length=713 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 84 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 25 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 24 AAAAAAAA 17 >seq40 Length=529 Score = 78.8 bits (86), Expect = 6e-11 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726 |||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| ||||| Sbjct 78 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 19 Query 9727 aaaaaCAA 9734 ||||| || Sbjct 18 AAAAAAAA 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 31269966944048