Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000688875.1_202014-04-08]
1,231 sequences; 31,415,732 total letters
Query= NC_030697.1
Length=9808
Score E
Sequences producing significant alignments: (Bits) Value
seq942 80.6 2e-11
seq153 78.8 6e-11
seq140 78.8 6e-11
seq40 78.8 6e-11
>seq942
Length=6590
Score = 80.6 bits (88), Expect = 2e-11
Identities = 65/79 (82%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 6506 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 6565
Query 9727 aaaaaCAAGAGGATATGAA 9745
||||| || | || | |||
Sbjct 6566 AAAAAAAAAAAGAAAAGAA 6584
>seq153
Length=918
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 839 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 898
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 899 AAAAAAAA 906
>seq140
Length=713
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 84 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 25
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 24 AAAAAAAA 17
>seq40
Length=529
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 78 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 19
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 18 AAAAAAAA 11
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 31269966944048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |