Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters
Query= NC_030697.1
Length=9808
Score E
Sequences producing significant alignments: (Bits) Value
seq2610 78.8 6e-11
seq2160 78.8 6e-11
seq1623 78.8 6e-11
seq1268 78.8 6e-11
seq478 78.8 6e-11
seq127 78.8 6e-11
>seq2610
Length=8670
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 6051 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 6110
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 6111 AAAAAAAA 6118
>seq2160
Length=16690
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 6112 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 6171
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 6172 AAAAAAAA 6179
>seq1623
Length=4196
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 70 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 11
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 10 AAAAAAAA 3
>seq1268
Length=10105
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 70 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 11
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 10 AAAAAAAA 3
>seq478
Length=43537
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 13943 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 14002
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 14003 AAAAAAAA 14010
>seq127
Length=3891
Score = 78.8 bits (86), Expect = 6e-11
Identities = 58/68 (85%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 9667 GATCGGAAGAGCGTCGTGGCGGGGAAAAGTGTAAATCCCGGGGGTCGCCGGATCCTTaaa 9726
|||||||||||||||||| ||| || |||||| ||| ||| |||||||| ||| |||||
Sbjct 3821 GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATTAAA 3880
Query 9727 aaaaaCAA 9734
||||| ||
Sbjct 3881 AAAAAAAA 3888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 31269156767072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |