Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_004049.1
Length=2617
Score E
Sequences producing significant alignments: (Bits) Value
seq73 80.6 4e-12
>seq73
Length=2088
Score = 80.6 bits (88), Expect = 4e-12
Identities = 130/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 1408 ATACTCAGTTGGGCAACCTATGGGAGCCTTATCATCATGAGCAATGCTTGCATTGTCTCA 1467
||| || || || |||||||||||||| ||| || |||| |||| | | || ||||
Sbjct 1070 ATATTCGGTAGGTCAACCTATGGGAGCTTTAAGCTCCTGAGGAATGTTAGATTTAACTCA 1011
Query 1468 TCATGTAATTGTACAAATAGCTGCAATGAGAGTTGGTAAACTCCCATTCACTAATTATGC 1527
|||| | || || || | || || | | |||||| | || |||||||
Sbjct 1010 TCATTTGATAGTTAAATTTGCAGCCTATCGTTTAGGTAAAAATTCTTTTGATAATTATAT 951
Query 1528 GTTACTTGGTGATGATATCGTAATAGCTGATAAAGCTGTTGCGACATCTTATCACATGAT 1587
|| | || |||||| | |||||||||||| | ||||||||||| || ||| || ||
Sbjct 950 TATATTGGGAGATGATGTTGTAATAGCTGATGAGGCTGTTGCGACTTCATATTTCAATAT 891
Query 1588 AATGACT 1594
|||||||
Sbjct 890 AATGACT 884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8265593325528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |