Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_004049.1 Length=2617 Score E Sequences producing significant alignments: (Bits) Value seq73 80.6 4e-12 >seq73 Length=2088 Score = 80.6 bits (88), Expect = 4e-12 Identities = 130/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 1408 ATACTCAGTTGGGCAACCTATGGGAGCCTTATCATCATGAGCAATGCTTGCATTGTCTCA 1467 ||| || || || |||||||||||||| ||| || |||| |||| | | || |||| Sbjct 1070 ATATTCGGTAGGTCAACCTATGGGAGCTTTAAGCTCCTGAGGAATGTTAGATTTAACTCA 1011 Query 1468 TCATGTAATTGTACAAATAGCTGCAATGAGAGTTGGTAAACTCCCATTCACTAATTATGC 1527 |||| | || || || | || || | | |||||| | || ||||||| Sbjct 1010 TCATTTGATAGTTAAATTTGCAGCCTATCGTTTAGGTAAAAATTCTTTTGATAATTATAT 951 Query 1528 GTTACTTGGTGATGATATCGTAATAGCTGATAAAGCTGTTGCGACATCTTATCACATGAT 1587 || | || |||||| | |||||||||||| | ||||||||||| || ||| || || Sbjct 950 TATATTGGGAGATGATGTTGTAATAGCTGATGAGGCTGTTGCGACTTCATATTTCAATAT 891 Query 1588 AATGACT 1594 ||||||| Sbjct 890 AATGACT 884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8265593325528