Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_004054.1 Length=2343 Score E Sequences producing significant alignments: (Bits) Value seq74 77.0 5e-11 >seq74 Length=1504 Score = 77.0 bits (84), Expect = 5e-11 Identities = 109/151 (72%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 1312 AAGTACATCATATTAGGAGATGACATTGTTATTAATAATGACAATGTTGC-TCTAAAATA 1370 || || || || || |||||||| ||||| ||||| ||||| || || | |||| | || Sbjct 235 AACTATATGATTTTGGGAGATGATATTGTAATTAACAATGATAAAGTATCATCTAGA-TA 177 Query 1371 TATGGAAATAATGAATGATTTTAAAGTTGAAATATCTAGAAACAAAACACATGTATCAAA 1430 | | |||||| | | || || || || ||| |||||||| |||||||| Sbjct 176 CTTTACATTAATGAGTAAACTTGGTGTAGATATTTCTGTTAACAAAACTCATGTATCGTT 117 Query 1431 TGATACATATGAATTTGCAAAAAGATGGATC 1461 ||||| ||||||||||| |||||||| ||| Sbjct 116 AGATACTTATGAATTTGCTAAAAGATGAATC 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7388794033544