Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_011372.1 Length=2805 Score E Sequences producing significant alignments: (Bits) Value seq73 87.8 3e-14 >seq73 Length=2088 Score = 87.8 bits (96), Expect = 3e-14 Identities = 189/269 (70%), Gaps = 14/269 (5%) Strand=Plus/Minus Query 1680 TATTCAGTTGGTCAACCTATGGGGGCATTATCCTCATGAGGTATGCTTGCTTTAACTCAT 1739 ||||| || |||||||||||||| || ||| ||| ||||| ||| | | |||||||||| Sbjct 1069 TATTCGGTAGGTCAACCTATGGGAGCTTTAAGCTCCTGAGGAATGTTAGATTTAACTCAT 1010 Query 1740 CATACGATAGTTCAAGTAGCAGCCTCAAGAGCAGGATATAAGGACTTGTTTCTAGATTAC 1799 ||| ||||||| || | ||||||| | ||| || || ||| || || |||| Sbjct 1009 CATTTGATAGTTAAATTTGCAGCCTATCGTTTAGG-TAAAAATTCTT-TTGATA-ATTAT 953 Query 1800 GCACTTTTAGGAGATGATATCTGT-ATAGCTAATAAAGCTGTAGCAGATAATTATCTTTT 1858 | || ||||||||| | ||| |||||| || | ||||| || || | || ||| Sbjct 952 ATTATATTGGGAGATGATGT-TGTAATAGCTGATGAGGCTGTTGC-GA-CTTCATATTTC 896 Query 1859 A--ATTATGCGT---GATCTAGGGGTTGAGATTAACCTATCTAAATCTTTGATTTCATCA 1913 | || ||| | || || ||||| ||||| || |||||| || ||||| ||| Sbjct 895 AATATAATGACTAAAGAACTGTTTGTTGATATTAATCTTTCTAAAGGATTAATTTC-TCA 837 Query 1914 -ACTGGTGTTGTTGAATTTGCAAAAAGAT 1941 | ||| || | |||||||| ||||||| Sbjct 836 TAACGGTTTTTTAGAATTTGCCAAAAGAT 808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8863992631800