Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_026510.1
Length=2530
Score E
Sequences producing significant alignments: (Bits) Value
seq74 95.1 2e-16
seq75 91.5 2e-15
>seq74
Length=1504
Score = 95.1 bits (104), Expect = 2e-16
Identities = 396/611 (65%), Gaps = 33/611 (5%)
Strand=Plus/Minus
Query 1008 CAATAGTTGAAGATCCTGAGCTGAAGATGAGACCAATAGCTATGGTTGATTACTATAGTC 1067
|||| ||| |||||||||| || || |||| ||||| ||| |||| || || ||
Sbjct 684 CAATTGTTAAAGATCCTGAACTAAAACGGAGAGTGATAGCCATGCTTGACTATCATTCTC 625
Query 1068 AATTGGTTCTGCGTCCGATTCATGATGGAATTCTTAAGAAATTAAGAAACCTCCCTCAAG 1127
|| | ||||| || || ||||||| |||||| || ||||||| | || |
Sbjct 624 AAGTAGTTCTTAAACCCATCCATGATGATCTTCTTAGTAATCTAAGAAAATTACCATGTG 565
Query 1128 ATAGGACATTCACTCAGAATCC---CTTTAACA-ACTGGGGTAAGACCATGGGGCACAAG 1183
|||| |||| ||||| | ||| |||||| | | | | || | ||| |||
Sbjct 564 ATAGAACATATACTCAAAGTCCGTTCTTTAATACAGTTCACTCAGTCAATGAT---CAA- 509
Query 1184 TTTTGATCACTCGATCTAACAAGTGCTACAGATCGTTTCCCTATATCTTTACAGGAGAAG 1243
||||||||| | ||| | | |||||| ||| | || || | || | || ||||
Sbjct 508 TTTTGATCAATTGATTTGAGTGCTGCTACTGATAGATTTCCAGTTACTCTCCAAAAGAAA 449
Query 1244 GTAAT-AGCCGGTCTTCTAAAAGACCCAG-TTAAAGCCAAAGCCTGACGAGATATATTAG 1301
||||| || || | || || | || || ||| | | |||| | ||||||
Sbjct 448 GTAATTAG--GGAGATGTACAACAATAAGCTTTTAGCTGATTCTTGACATCGTCTATTAG 391
Query 1302 TTGATAGGGATTATAAGCTACCCACTGGAGGATTTACACGTTACAG----TGTTGGTCAA 1357
| ||||| | || | | ||| ||||| ||| | | | ||||||||||
Sbjct 390 TAGATAGAGTTT-TCACCTATA------AGGATCAACAGATGAAATATGCTGTTGGTCAA 338
Query 1358 CCTATGGGTGCTTATAGTTCTTGGACAACTTTTACTCTTACACACCACATGGTTGTTCAC 1417
|||||||||||||| | ||| || | |||| ||||| || || | ||| |||
Sbjct 337 CCTATGGGTGCTTACTCTAGTTGAGCAGCATTTAGCCTTACTCATCATCTATGTGTGCAC 278
Query 1418 T-ATGCTGCACATTTGTGCGGT------ATAGGGGATTTTAACAAGTATATATTGCTTGG 1470
| ||| |||| | || ||| ||||| ||| || || ||||| | | ||
Sbjct 277 TGATG-TGCATACTTAGAAGGTTATTCAATAGGATCTTTCAAAAACTATATGATTTTGGG 219
Query 1471 AGACGATATCGTGATTAATCATGATAAAGTAGCCAGGGCATA-TATCCGTGTTATGACCA 1529
||| ||||| || ||||| ||||||||||| | ||| | | | | | |||| |
Sbjct 218 AGATGATATTGTAATTAACAATGATAAAGTATCATCTAGATACTTTACAT-TAATGAGTA 160
Query 1530 AGCTTGGTGTGGATATCTCAGTTGCAAAGACACATGTGTCCAAAAACACATATGAATTTG 1589
| |||||||| ||||| || ||| || || ||||| || | | || ||||||||||
Sbjct 159 AACTTGGTGTAGATATTTCTGTTAACAAAACTCATGTATCGTTAGATACTTATGAATTTG 100
Query 1590 CTAAGAGATGA 1600
|||| ||||||
Sbjct 99 CTAAAAGATGA 89
>seq75
Length=1460
Score = 91.5 bits (100), Expect = 2e-15
Identities = 176/255 (69%), Gaps = 6/255 (2%)
Strand=Plus/Plus
Query 1349 GTTGGTCAACCTATGGGTGCTTATAGTTCTTGGACAACTTTTACTCTTACACACCACATG 1408
||||||||||| ||||| ||||||| |||| | | || || | | ||||| |
Sbjct 477 GTTGGTCAACCAATGGGAGCTTATACAAGTTGGGCTGCGTTCACATTGGCTCACCATCTT 536
Query 1409 GTTGTTCACTATGCTGCACATTTGTGCGGTATAGGGGATTTTAACAAGTATATATTGCTT 1468
|| || || || ||| | | |||||| ||| ||||||| | |||||| | |
Sbjct 537 GTAATTGCCTGAGCCGCAAAACTATGCGGTTTAGATAATTTTAAAGATTATATAATTTTA 596
Query 1469 GGAGACGATATCGTGATTAATCATGATAAAGTAG--CCAGGGCATATATCCGTGTTATGA 1526
|| |||||| | ||||| || || ||||||| | | | | ||||| | | | ||||
Sbjct 597 GGTGACGATGTTGTGATAAAACACAATAAAGTTGCTCAAAAGTATATAAC--TTTAATGA 654
Query 1527 CCAAGCT-TGGTGTGGATATCTCAGTTGCAAAGACACATGTGTCCAAAAACACATATGAA 1585
|||| | || || || ||||| ||||||||||||| |||| |||||||||
Sbjct 655 -CAAGATGAGGAGTTGAGATCTCTCCAACAAAGACACATGTTAGTAAAACAACATATGAA 713
Query 1586 TTTGCTAAGAGATGA 1600
||||| |||||||||
Sbjct 714 TTTGCGAAGAGATGA 728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7987193550336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |