Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_026621.1
Length=2414
Score E
Sequences producing significant alignments: (Bits) Value
seq74 100 4e-18
>seq74
Length=1504
Score = 100 bits (110), Expect = 4e-18
Identities = 220/313 (70%), Gaps = 29/313 (9%)
Strand=Plus/Minus
Query 1205 ATATTCTGTAGGTCAACCAATGGGAGCCTA---TAGTTCCTGAGCTGCATTCACACTTAC 1261
|||| |||| |||||||| ||||| || || ||||| |||| ||||| | |||||
Sbjct 353 ATATGCTGTTGGTCAACCTATGGGTGCTTACTCTAGTT---GAGCAGCATTTAGCCTTAC 297
Query 1262 TCATCACCTGGTAGTCGCA-TGATCGGCCTA--TAAAAGTAGGAAGACCAT-GGA-CTTT 1316
|||||| || || ||| |||| || || || ||| | | | || ||| ||||
Sbjct 296 TCATCATCTATGTGT-GCACTGATGTGCATACTTAGAAG--GTTATTCAATAGGATCTTT 240
Query 1317 GACCAA-TATATTATACTTGGAGATGACATTGTTATAAAAGACAATGCCATAGCCAGTAT 1375
| || ||||| || | |||||||| ||||| || || ||||| ||| |||||
Sbjct 239 CAAAAACTATATGATTTTGGGAGATGATATTGTAATTAA---CAATG--ATAA--AGTAT 187
Query 1376 -ATATAGAGG--TCAGATGA-TGAGAA---TGGGTGTGGATATATCAATTCCCAAAACAC 1428
|| |||| | | || | |||| | | ||||| ||||| || || |||||| |
Sbjct 186 CATCTAGATACTTTACATTAATGAGTAAACTTGGTGTAGATATTTCTGTTAACAAAACTC 127
Query 1429 ATGTATCAAAAGATACATATGAGTTTGCGAAAAGATGAATCAAAGACAGCAAAGAAATTA 1488
||||||| |||||| ||||| ||||| |||||||||||| | | | || || ||||
Sbjct 126 ATGTATCGTTAGATACTTATGAATTTGCTAAAAGATGAATCTGCGCCGGTAAGGAGATTA 67
Query 1489 CTGGATTACCTCT 1501
|||||||||| ||
Sbjct 66 CTGGATTACCACT 54
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7615993850080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |