Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03- 01] 76 sequences; 29,468,565 total letters Query= NC_026621.1 Length=2414 Score E Sequences producing significant alignments: (Bits) Value seq74 100 4e-18 >seq74 Length=1504 Score = 100 bits (110), Expect = 4e-18 Identities = 220/313 (70%), Gaps = 29/313 (9%) Strand=Plus/Minus Query 1205 ATATTCTGTAGGTCAACCAATGGGAGCCTA---TAGTTCCTGAGCTGCATTCACACTTAC 1261 |||| |||| |||||||| ||||| || || ||||| |||| ||||| | ||||| Sbjct 353 ATATGCTGTTGGTCAACCTATGGGTGCTTACTCTAGTT---GAGCAGCATTTAGCCTTAC 297 Query 1262 TCATCACCTGGTAGTCGCA-TGATCGGCCTA--TAAAAGTAGGAAGACCAT-GGA-CTTT 1316 |||||| || || ||| |||| || || || ||| | | | || ||| |||| Sbjct 296 TCATCATCTATGTGT-GCACTGATGTGCATACTTAGAAG--GTTATTCAATAGGATCTTT 240 Query 1317 GACCAA-TATATTATACTTGGAGATGACATTGTTATAAAAGACAATGCCATAGCCAGTAT 1375 | || ||||| || | |||||||| ||||| || || ||||| ||| ||||| Sbjct 239 CAAAAACTATATGATTTTGGGAGATGATATTGTAATTAA---CAATG--ATAA--AGTAT 187 Query 1376 -ATATAGAGG--TCAGATGA-TGAGAA---TGGGTGTGGATATATCAATTCCCAAAACAC 1428 || |||| | | || | |||| | | ||||| ||||| || || |||||| | Sbjct 186 CATCTAGATACTTTACATTAATGAGTAAACTTGGTGTAGATATTTCTGTTAACAAAACTC 127 Query 1429 ATGTATCAAAAGATACATATGAGTTTGCGAAAAGATGAATCAAAGACAGCAAAGAAATTA 1488 ||||||| |||||| ||||| ||||| |||||||||||| | | | || || |||| Sbjct 126 ATGTATCGTTAGATACTTATGAATTTGCTAAAAGATGAATCTGCGCCGGTAAGGAGATTA 67 Query 1489 CTGGATTACCTCT 1501 |||||||||| || Sbjct 66 CTGGATTACCACT 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7615993850080