Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_028475.1
Length=2617
Score E
Sequences producing significant alignments: (Bits) Value
seq73 96.9 6e-17
>seq73
Length=2088
Score = 96.9 bits (106), Expect = 6e-17
Identities = 237/355 (67%), Gaps = 21/355 (6%)
Strand=Plus/Minus
Query 1288 TGACCTTTCGGCCGCAACGGATAGACTACCAATAAATCTCCAGAAAGATATTCTTTCGAT 1347
||||||||| || || || |||||||| || ||| || ||| |||| |||||||||||
Sbjct 1232 TGACCTTTCAGCTGCTACTGATAGACTTCCGATATTGCTTCAGGAAGAGATTCTTTCGAT 1173
Query 1348 TTATTGT-GGTGAAAGTTTTGC-----CTCTAAGTGATCAATATTGAT-GACTGATAGAG 1400
|| |||| || ||| |||| | || ||| |||| ||||| | ||| || ||
Sbjct 1172 TT-TTGTCGGAGAATCTTTTTCTAAAGCTTGAAGAGATC--TATTGGTAGACAGAGAGTA 1116
Query 1401 ACTGATACTTAA--CCAAAGAGAAACGT---------AATTTACGTTATTCTGTAGGTCA 1449
| ||| ||| | ||| || | | |||||| ||||| ||||||||
Sbjct 1115 TGTTTTACCTAAATCTAAATTTAATCCTTCTGAATTAAATTTAAAATATTCGGTAGGTCA 1056
Query 1450 ACCGATGGGTGCCTTGAGTTCATGAGCAATGTTAGCTTTAACTCATCACTTTATTGTAGG 1509
||| ||||| || || || || |||| |||||||| |||||||||||| || || ||
Sbjct 1055 ACCTATGGGAGCTTTAAGCTCCTGAGGAATGTTAGATTTAACTCATCATTTGATAGTTAA 996
Query 1510 TATGGCGGCAAACCGAGTTGGGAAACTTGGTTTTAACCACTATGCTTTACTTGGTGATGA 1569
| || || | || | || ||| | |||| | | ||| | || | || |||||
Sbjct 995 ATTTGCAGCCTATCGTTTAGGTAAAAATTCTTTTGATAATTATATTATATTGGGAGATGA 936
Query 1570 TATAGTTATTGCTGACAAATCTGTAGCAGATTCCTATTATATGATCATGACTGAA 1624
| | || || ||||| | |||| || ||| |||| | || |||||| ||
Sbjct 935 TGTTGTAATAGCTGATGAGGCTGTTGCGACTTCATATTTCAATATAATGACTAAA 881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 8265593325528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |