Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_030747.1
Length=2506
Score E
Sequences producing significant alignments: (Bits) Value
seq74 167 4e-38
seq75 93.3 7e-16
>seq74
Length=1504
Score = 167 bits (184), Expect = 4e-38
Identities = 218/299 (73%), Gaps = 6/299 (2%)
Strand=Plus/Minus
Query 1236 GGTCAACCTATGGGTTCATATTCTTCCTGAGCTGCCTTTACACTTACACACCATTTAGTT 1295
||||||||||||||| | || ||| ||||| || |||| ||||| || ||| || |
Sbjct 343 GGTCAACCTATGGGTGCTTACTCTAGTTGAGCAGCATTTAGCCTTACTCATCATCTATGT 284
Query 1296 TTACACTGATGTGCAAAATTAAATGGTA--TAGATA--ATTTTTCAGAT--TATATAATT 1349
| |||||||||||| | ||| | ||| | ||| || ||||| | ||||| |||
Sbjct 283 GTGCACTGATGTGCATACTTAGAAGGTTATTCAATAGGATCTTTCAAAAACTATATGATT 224
Query 1350 CTTGGTGATGATATCGTTATAAAAAATGATAAAGTCGCAAGAACTTACATAAAATGAATG 1409
| || |||||||| || || || ||||||||||| || | ||| | | || ||||
Sbjct 223 TTGGGAGATGATATTGTAATTAACAATGATAAAGTATCATCTAGATACTTTACATTAATG 164
Query 1410 GATTATCTAGGTGTGGAATTATCTGATAGTAAAACACATGTATCGAAAGATACATATGAA 1469
| | || ||||| || | |||| || ||||| ||||||||| |||||| ||||||
Sbjct 163 AGTAAACTTGGTGTAGATATTTCTGTTAACAAAACTCATGTATCGTTAGATACTTATGAA 104
Query 1470 TTTGCTAAAAGATGATTCTGTAAAGGAAAAGAATTTACTGGATTACCAATGAATGGAAT 1528
||||||||||||||| |||| || || || |||||||||||||| | ||||||
Sbjct 103 TTTGCTAAAAGATGAATCTGCGCCGGTAAGGAGATTACTGGATTACCACTTGGTGGAAT 45
>seq75
Length=1460
Score = 93.3 bits (102), Expect = 7e-16
Identities = 174/253 (69%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 1236 GGTCAACCTATGGGTTCATATTCTTCCTGAGCTGCCTTTACACTTACACACCATTTAGTT 1295
|||||||| ||||| | ||| | || ||||| || ||| | | |||||| | ||
Sbjct 480 GGTCAACCAATGGGAGCTTATACAAGTTGGGCTGCGTTCACATTGGCTCACCATCTTGTA 539
Query 1296 TTACACTGATGTGCAAAATTAAATGGTATAGATAATTTTTCAGATTATATAATTCTTGGT 1355
| |||| |||||| || ||| ||||||||||| ||||||||||||| | |||
Sbjct 540 ATTGCCTGAGCCGCAAAACTATGCGGTTTAGATAATTTTAAAGATTATATAATTTTAGGT 599
Query 1356 GATGATATCGTTATAAAAAATGATAAAGTCGCAAGAACTTACATAAAATGAATG-GATTA 1414
|| ||| | || |||||| | ||||||| || || || |||| | |||| | |
Sbjct 600 GACGATGTTGTGATAAAACACAATAAAGTTGCTCAAAAGTATATAACTTTAATGACAAGA 659
Query 1415 TCTAGGTGTGGAATTATCTGATAGTAAAACACATGTATCGAAAGATACATATGAATTTGC 1474
| ||| || || | ||| | || |||||||| ||| ||||||||||||||
Sbjct 660 T-GAGGAGTTGAGATCTCTCCAACAAAGACACATGTTAGTAAAACAACATATGAATTTGC 718
Query 1475 TAAAAGATGATTC 1487
|| |||||| ||
Sbjct 719 GAAGAGATGAATC 731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7910393612352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |