Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_030861.1
Length=2397
Score E
Sequences producing significant alignments: (Bits) Value
seq75 127 3e-26
seq74 113 7e-22
>seq75
Length=1460
Score = 127 bits (140), Expect = 3e-26
Identities = 182/254 (72%), Gaps = 2/254 (1%)
Strand=Plus/Plus
Query 1224 TGGACAGCCTATGGGAACATACTCAAGTTGAGTATCATTCACATTGGCTCACCATTTAGT 1283
||| || || |||||| | || ||||||| | | |||||||||||||||||| | ||
Sbjct 479 TGGTCAACCAATGGGAGCTTATACAAGTTGGGCTGCGTTCACATTGGCTCACCATCTTGT 538
Query 1284 TGTGCACTGATGTGCAAAACTAGAAGGAGTTAAAGATTTTGATCAGTATATAATCCTAGG 1343
| |||| ||||||||| || | | ||||| | | |||||||| ||||
Sbjct 539 AATTGCCTGAGCCGCAAAACTATGCGGTTTAGATAATTTTAAAGATTATATAATTTTAGG 598
Query 1344 TGATGATATTGTAATAAAACACAATAAAATTGC-CAAAAGATATATAAAGATCATGGAGA 1402
||| ||| |||| ||||||||||||||| |||| |||||| ||||||| | ||| |
Sbjct 599 TGACGATGTTGTGATAAAACACAATAAAGTTGCTCAAAAG-TATATAACTTTAATGACAA 657
Query 1403 AACTAGGTGTCGAATTATCTCTTGCAAAAACACATGTATCTGAAGATACTTATGAATTTG 1462
| ||| || || | |||| |||| |||||||| | || || ||||||||||
Sbjct 658 GATGAGGAGTTGAGATCTCTCCAACAAAGACACATGTTAGTAAAACAACATATGAATTTG 717
Query 1463 CGAAAAGATGATTC 1476
|||| |||||| ||
Sbjct 718 CGAAGAGATGAATC 731
>seq74
Length=1504
Score = 113 bits (124), Expect = 7e-22
Identities = 183/262 (70%), Gaps = 6/262 (2%)
Strand=Plus/Minus
Query 1221 TGCTGGACAGCCTATGGGAACATACTCAAGTTGAGTATCATTCACATTGGCTCACCATTT 1280
|| ||| || |||||||| | ||||| ||||||| | |||| | | |||| ||| |
Sbjct 347 TGTTGGTCAACCTATGGGTGCTTACTCTAGTTGAGCAGCATTTAGCCTTACTCATCATCT 288
Query 1281 AGTTGTGCACTGATGTGCAAAACTAGAAGGAG-TTAAAGA-----TTTTGATCAGTATAT 1334
| |||||||||||||||| | ||||||| || || | ||| | | |||||
Sbjct 287 ATGTGTGCACTGATGTGCATACTTAGAAGGTTATTCAATAGGATCTTTCAAAAACTATAT 228
Query 1335 AATCCTAGGTGATGATATTGTAATAAAACACAATAAAATTGCCAAAAGATATATAAAGAT 1394
|| | || |||||||||||||| || | ||||| | | ||||| | | |
Sbjct 227 GATTTTGGGAGATGATATTGTAATTAACAATGATAAAGTATCATCTAGATACTTTACATT 168
Query 1395 CATGGAGAAACTAGGTGTCGAATTATCTCTTGCAAAAACACATGTATCTGAAGATACTTA 1454
||| ||||| ||||| || | ||| || ||||| |||||||| |||||||||
Sbjct 167 AATGAGTAAACTTGGTGTAGATATTTCTGTTAACAAAACTCATGTATCGTTAGATACTTA 108
Query 1455 TGAATTTGCGAAAAGATGATTC 1476
||||||||| ||||||||| ||
Sbjct 107 TGAATTTGCTAAAAGATGAATC 86
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7561593894008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |