Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thielaviopsis_20paradoxa_20[genbank_20GCA_5F001599055.1_202016-03-
01] 76 sequences; 29,468,565 total letters
Query= NC_030862.1
Length=2414
Score E
Sequences producing significant alignments: (Bits) Value
seq75 96.9 5e-17
>seq75
Length=1460
Score = 96.9 bits (106), Expect = 5e-17
Identities = 199/290 (69%), Gaps = 17/290 (6%)
Strand=Plus/Plus
Query 1206 TATGCAGTTGGACAACCAATGGGGGCATATAGCTCGTGAGCAGCATTCACA----CTTAC 1261
||| ||||||| ||||||||||| || |||| || || || |||||| || ||
Sbjct 471 TATTCAGTTGGTCAACCAATGGGAGCTTATACAAGTTGGGCTGCGTTCACATTGGCTCAC 530
Query 1262 ACATCATTTAACCGTTGCCTGATCTGCTTA-CAAAGCAAGAAAGACTATGGGATTTGACC 1320
|||| | ||| |||||||| | || | | | || ||| || ||| |
Sbjct 531 -CATCTTGTAA---TTGCCTGAGCCGCAAAACTATGCGGTTTAGATAAT----TTTAAAG 582
Query 1321 AATATATAATATTAGGTGATGATATTGTCATAAAAGACAATAGAATTGCCGAAATATATA 1380
| |||||||| |||||||| ||| |||| |||||| |||||| | |||| ||| ||||
Sbjct 583 ATTATATAATTTTAGGTGACGATGTTGTGATAAAACACAATAAAGTTGCTCAAAAGTATA 642
Query 1381 AAGGTCAGATGATGAGAATGGGTGTGGACATATCTCTACCAAAAACACACGTGTCCGTAG 1440
| | |||| ||| || || || || |||| | |||| ||||| ||| |||
Sbjct 643 TAACTTTAATGACAAGATGAGGAGTTGAGATCTCTCCAACAAAGACACA--TGTTAGTAA 700
Query 1441 AT--ACGTATGAATTTGCAAAGAGATGAATCAAGAAGGACAGAGAGATTA 1488
| || ||||||||||| |||||||||||| | || | | |||||||
Sbjct 701 AACAACATATGAATTTGCGAAGAGATGAATCCAAAACAATCGTGAGATTA 750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7615993850080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |