Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_004049.1 Length=2617 Score E Sequences producing significant alignments: (Bits) Value seq945 150 3e-33 >seq945 Length=20063 Score = 150 bits (166), Expect = 3e-33 Identities = 241/334 (72%), Gaps = 9/334 (3%) Strand=Plus/Plus Query 1400 CCTTATAGATACTCAGTTGGGCAACCTATGGGAGC-CTTATCATCATGAGCAATGCTTGC 1458 ||||| || || ||||| || ||||| |||||||| |||| | || |||||||| || Sbjct 1574 CCTTA-AGGTATTCAGTCGGTCAACCAATGGGAGCTCTTAGTTAC-TGGGCAATGCTCGC 1631 Query 1459 ATTGTCTCATCATGTAATTGTACAAATAGCTGCAATGAGAGTTGGTAAACTCCCATTCAC 1518 ||| |||||||| || ||| |||||| || | |||||||||| | | || || Sbjct 1632 ATTAACTCATCATACCATAGTAAGAATAGCGGCGAATAGAGTTGGTATAACCAACTTTAC 1691 Query 1519 TAATTATGCGTTACTTGGTGATGATATCGTAATAGCTGATAAAGCTGTTGC-GACATCTT 1577 | | || || ||||||||||||||||| || | || | || |||| || || | || Sbjct 1692 TCACTACGCCTTACTTGGTGATGATATTGTTCTTGCGAACAAGTCTGTAGCTGATA-GTT 1750 Query 1578 ATCA-CATGATAATGACTCAGATCCTTGGGGTTGA-AATCAACTTATCCAAATCACTTGT 1635 |||| ||| | ||||| | || ||||| || | ||| ||| || || ||| | || Sbjct 1751 ATCATCAT-TTGATGACAACTGTGCTCGGGGTAGACATTCATCTT-TCTAAGTCATTAGT 1808 Query 1636 CTCTAACAACTCTTTCGAGTTTGCTAAGAGATTGGTGACTATGGATGGGGAAGTTTCAGC 1695 |||||| | | ||| || || ||||||||| | |||||| | || |||||||| | Sbjct 1809 CTCTAAGGATTATTTTGAATTCGCTAAGAGAATAGTGACTTTCAGAGGTGAAGTTTCTAC 1868 Query 1696 TGTGGGAGCTAAGAATTTATTAGTAGCTCTAAAA 1729 || ||||| |||||||||||||||| ||| ||| Sbjct 1869 AGTTGGAGCCAAGAATTTATTAGTAGGTCTTAAA 1902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8265475907514