Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20inaequalis_20[genbank_20GCA_5F002148305.1_202016-10-31] 1,413 sequences; 60,939,407 total letters Query= NC_028475.1 Length=2617 Score E Sequences producing significant alignments: (Bits) Value seq945 134 2e-28 >seq945 Length=20063 Score = 134 bits (148), Expect = 2e-28 Identities = 255/368 (69%), Gaps = 18/368 (5%) Strand=Plus/Plus Query 1430 TTACGTTATTCTGTAGGTCAACCGATGGGTGCCTTGAGTTCATGAGCAATGTTAGCTTTA 1489 ||| | ||||| || |||||||| ||||| || | |||| || |||||| | || ||| Sbjct 1576 TTAAGGTATTCAGTCGGTCAACCAATGGGAGCTCTTAGTTACTGGGCAATGCTCGCATTA 1635 Query 1490 ACTCATCACTTTATTGTAGGTATGGCGGCAAACCGAGTTGGGAAACTTGGTTTTAACCAC 1549 |||||||| || ||| | || ||||| || ||||||| | | |||| ||| Sbjct 1636 ACTCATCATACCATAGTAAGAATAGCGGCGAATAGAGTTGGTATAACCAACTTTACTCAC 1695 Query 1550 TATGCTTTACTTGGTGATGATATAGTTATTGCTGACAAATCTGTAGCAGA---TTCCTAT 1606 || || ||||||||||||||||| ||| |||| |||| |||||||| || || || Sbjct 1696 TACGCCTTACTTGGTGATGATATTGTTCTTGCGAACAAGTCTGTAGCTGATAGTTATCAT 1755 Query 1607 TATATGATCATGACTGAAATCCTTGGTGTTCA-AATCAACTTATCAAAGTCGCTAGTTAG 1665 || |||| | |||| | || || || | | ||| ||| || ||||| |||| Sbjct 1756 CATTTGATGACAACTG---TGCTCGGGGTAGACATTCATCTT-TCTAAGTCATTAGT--- 1808 Query 1666 CACTA---ATTCTTTCGAATTTGCTAAAAGACTAGTAACTCTGGAAGGTGAAGTGACACC 1722 | ||| ||| ||| ||||| ||||| ||| |||| ||| | ||||||||| | | Sbjct 1809 CTCTAAGGATTATTTTGAATTCGCTAAGAGAATAGTGACTTTCAGAGGTGAAGTTTCTAC 1868 Query 1723 GGCGGGACCAGCAAACATT--TTGTTAGGCCTAAGAAGTCTTAATGGAATTCCTTCCATT 1780 | ||| | ||| ||| || |||| || | ||||||||| || ||||| || || Sbjct 1869 AGTTGGAGC--CAAGAATTTATTAGTAGGTCTTAAAAGTCTTAAGGGTATTCCCTCTATA 1926 Query 1781 ATTTTAGA 1788 |||| || Sbjct 1927 CTTTTGGA 1934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8265475907514