Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_004102.1 Length=9646 Score E Sequences producing significant alignments: (Bits) Value seq731 762 0.0 seq2038 744 0.0 >seq731 Length=514 Score = 762 bits (844), Expect = 0.0 Identities = 466/495 (94%), Gaps = 0/495 (0%) Strand=Plus/Minus Query 834 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTCCTTCTGGCCCTGCTCTCTTGC 893 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455 Query 894 CTGACTGTGCCCGCTTCAGCCTACCAAGTGCGCAATTCCTCGGGGCTTTACCATGTCACC 953 |||||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||| Sbjct 454 CTGACTGTGCCCGCTTCAGCCTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCACC 395 Query 954 AATGATTGCCCTAACTCGAGTATTGTGTACGAGGCGGCCGATGCCATCCTGCACACTCCG 1013 ||||||||||||||||||||||||||||||||| |||| || ||||||||||| |||||| Sbjct 394 AATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCCG 335 Query 1014 GGGTGTGTCCCTTGCGTTCGCGAGGGTAACGCCTCGAGGTGTTGGGTGGCGGTGACCCCC 1073 |||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||| Sbjct 334 GGGTGTGTCCCTTGCGTTCGTGAGGGCAACAGCTCGAGGTGTTGGGTGGCGTTGACCCCC 275 Query 1074 ACGGTGGCCACCAGGGACGGCAAACTCCCCACAACGCAGCTTCGACGTCATATCGATCTG 1133 ||||||||||||| ||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct 274 ACGGTGGCCACCAAGGACGGCAAGCTCCCCACGACGCAGCTTCGACGTCACATCGATCTG 215 Query 1134 CTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTACGTGGGGGACCTGTGCGGGTCTGTC 1193 ||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||| Sbjct 214 CTTGTCGGGAGCGCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGGGGCTGTC 155 Query 1194 TTTCTTGTTGGTCAACTGTTTACCTTCTCTCCCAGGCGCCACTGGACGACGCAAGACTGC 1253 |||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||| ||| Sbjct 154 TTTCTTGTCGGTCAGCTGTTTACCTTTTCTCCCAGGCACCACTGGACGACGCAAGAATGC 95 Query 1254 AATTGTTCTATCTATCCCGGCCATATAACGGGTCATCGCATGGCATGGGATATGATGATG 1313 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 94 AATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATATGATGATG 35 Query 1314 AACTGGTCCCCTACG 1328 ||||||||||||||| Sbjct 34 AACTGGTCCCCTACG 20 >seq2038 Length=495 Score = 744 bits (824), Expect = 0.0 Identities = 462/495 (93%), Gaps = 0/495 (0%) Strand=Plus/Minus Query 834 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTCCTTCTGGCCCTGCTCTCTTGC 893 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436 Query 894 CTGACTGTGCCCGCTTCAGCCTACCAAGTGCGCAATTCCTCGGGGCTTTACCATGTCACC 953 ||||||| ||||| |||||||||||||| ||||| ||| |||| ||||||||||||||| Sbjct 435 TTGACTGTACCCGCGTCAGCCTACCAAGTACGCAACTCCACGGGCCTTTACCATGTCACC 376 Query 954 AATGATTGCCCTAACTCGAGTATTGTGTACGAGGCGGCCGATGCCATCCTGCACACTCCG 1013 |||||||||||||||||||| |||||||||||| |||||||| |||||| ||| ||||| Sbjct 375 AATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGCATCCTACACTCTCCG 316 Query 1014 GGGTGTGTCCCTTGCGTTCGCGAGGGTAACGCCTCGAGGTGTTGGGTGGCGGTGACCCCC 1073 |||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||||| Sbjct 315 GGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCGCCCCC 256 Query 1074 ACGGTGGCCACCAGGGACGGCAAACTCCCCACAACGCAGCTTCGACGTCATATCGATCTG 1133 || || |||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct 255 ACAGTCGCCACCAGGGACGGTAAGCTCCCCACAACGCAGCTTCGACGTCACATCGATCTG 196 Query 1134 CTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTACGTGGGGGACCTGTGCGGGTCTGTC 1193 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 195 CTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTATGTGGGGGACCTGTGCGGGTCTGTC 136 Query 1194 TTTCTTGTTGGTCAACTGTTTACCTTCTCTCCCAGGCGCCACTGGACGACGCAAGACTGC 1253 |||||||| ||||||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 135 TTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACGCAAGACTGC 76 Query 1254 AATTGTTCTATCTATCCCGGCCATATAACGGGTCATCGCATGGCATGGGATATGATGATG 1313 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 75 AACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGGGATATGATGATG 16 Query 1314 AACTGGTCCCCTACG 1328 ||||||||||||||| Sbjct 15 AACTGGTCCCCTACG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30748914382760