Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009823.1 Length=9711 Score E Sequences producing significant alignments: (Bits) Value seq2038 140 2e-29 seq731 125 4e-25 >seq2038 Length=495 Score = 140 bits (154), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 1117 GACG-CACATCGACATGGTTGTGATGTCCGCCACGCTCTGCTCTGCCCTCTACGTGGGGG 1175 |||| |||||||| || |||| | |||||| |||||||| |||||||| ||||||| Sbjct 212 GACGTCACATCGATCTGCTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTATGTGGGGG 153 Query 1176 ACCTCTGCGGTGGGGTGATGCTCGCAGCCCAAATGTTCATTGTCTCGCCGCAGCACCACT 1235 |||| ||||| || | || | | ||| |||||| |||| || || ||||| Sbjct 152 ACCTGTGCGGGTCTGTCTTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACT 93 Query 1236 GGTTTGTCCAAGACTGCAATTGCTCCATCTACCCTGGTACCATCACTGGACACCGCATGG 1295 || ||||||||||| || ||||||||||| || || || || |||||||||| Sbjct 92 GGACAACGCAAGACTGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGG 33 Query 1296 CATGGGACATGATGATGAACTGGTCGCCCACG 1327 ||||||| ||||||||||||||||| || ||| Sbjct 32 CATGGGATATGATGATGAACTGGTCCCCTACG 1 >seq731 Length=514 Score = 125 bits (138), Expect = 4e-25 Identities = 158/214 (74%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 1117 GACG-CACATCGACATGGTTGTGATGTCCGCCACGCTCTGCTCTGCCCTCTACGTGGGGG 1175 |||| |||||||| || |||| | |||||| |||||||| || || |||||||||| Sbjct 231 GACGTCACATCGATCTGCTTGTCGGGAGCGCCACCCTCTGCTCGGCTCTTTACGTGGGGG 172 Query 1176 ACCTCTGCGGTGGGGTGATGCTCGCAGCCCAAATGTTCA--TTGTCTCGCCGCAGCACCA 1233 | || ||||| | || | || | | || |||| | || |||| | | |||||| Sbjct 171 ATCTGTGCGGGGCTGTCTTTCTTGTCGGTCAGCTGTTTACCTTTTCTCCCAG--GCACCA 114 Query 1234 CTGGTTTGTCCAAGACTGCAATTGCTCCATCTACCCTGGTACCATCACTGGACACCGCAT 1293 |||| ||||| |||||||| || ||||| || || ||| || || |||||||| Sbjct 113 CTGGACGACGCAAGAATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCAT 54 Query 1294 GGCATGGGACATGATGATGAACTGGTCGCCCACG 1327 ||||||||| ||||||||||||||||| || ||| Sbjct 53 GGCATGGGATATGATGATGAACTGGTCCCCTACG 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30956893512300