Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009824.1 Length=9456 Score E Sequences producing significant alignments: (Bits) Value seq2038 145 5e-31 >seq2038 Length=495 Score = 145 bits (160), Expect = 5e-31 Identities = 338/502 (67%), Gaps = 22/502 (4%) Strand=Plus/Minus Query 832 GCAACAGGGAACTTGCCCGGTTGCTCCTTTTCTATCTTCCTTCTTGCTCTGTTCTCTTGC 891 |||||||||||| | || |||||||| || |||||||| ||||| || ||| |||||||| Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436 Query 892 TTAATTCATCCAGCAGCCAGTCTAG--AGTGGCGGAATACGTCTGGCCTCTACGTCCTTA 949 || | | || || | ||| ||| ||| || || | | ||||| ||| | | Sbjct 435 TTGACTGTACCCGC-GTCAGCCTACCAAGTA-CGCAACTCCACGGGCCTTTACCATGTCA 378 Query 950 CCAACGACTGTTCCAATAGCAGTATTGTGTATGAGGCCGATGATGTCATTCTGCACACAC 1009 |||| || || | || || |||||||| ||| | | ||| ||| || ||| | | Sbjct 377 CCAATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGCATCCTACACTCTC 318 Query 1010 CCGGCTGTGTACCTTGTGTCCAGGACGGCAATACATCTACGTGCTGGACCCCAGTGACAC 1069 | || ||||| ||||| || | || ||||| | || | || ||| || || | | Sbjct 317 CGGGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCGCCC 258 Query 1070 CTACAGTGGCAGTCAGGTACG------TCGGAGCAACTACTGCTTCGATACGCAGTCATG 1123 | ||||| || |||| ||| || |||| | ||||||| |||| Sbjct 257 CCACAGTCGCCACCAGGGACGGTAAGCTCCCCACAACG-CAGCTTCGAC-----GTCACA 204 Query 1124 TGGACCTATTAGTAGGCGCGGCCACGATGTGCTCTGCGCTCTACGTGGGTGATATGTGTG 1183 | || || | || || ||||| | ||||| || ||||| ||||| || |||| | Sbjct 203 TCGATCTGCTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTATGTGGGGGACCTGTGCG 144 Query 1184 GGGCTGTCTTTCTCGTGGGACAAGCCTTCACGTTCAGACCTCGACGCCATCA---AACGG 1240 || |||||||||| || || ||| ||||| ||| || | ||||| |||| Sbjct 143 GGTCTGTCTTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACG- 85 Query 1241 TCCAGACCTGTAACTGCTCGCTGTACCCAGGCCATCTTTCAGGACATCGAATGGCTTGGG 1300 | |||| || ||||| || | ||||| |||||| | | || || || ||||| |||| Sbjct 84 -CAAGAC-TGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGGG 27 Query 1301 ATATGATGATGAATTGGTCCCC 1322 ||||||||||||| |||||||| Sbjct 26 ATATGATGATGAACTGGTCCCC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30140975388720